ROBOT Report - fbbi

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Types of errors

LevelNumber of errors
ERROR7
WARN562
INFO46

Error breakdown

RuleNumber of errors
missing_label1
missing_ontology_description1
duplicate_label3
missing_ontology_license1
missing_ontology_title1
missing_definition455
missing_obsolete_label107
lowercase_definition46

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Row Level Rule Name Subject Property Value
1 ERROR missing_label obo:fbbi#PhenoImageShare_ImagingMethod rdfs:label
2 ERROR missing_ontology_description http://purl.obolibrary.org/obo/fbbi.owl dc11:description
3 ERROR duplicate_label nearfield illumination rdfs:label nearfield illumination
4 ERROR duplicate_label nearfield illumination rdfs:label nearfield illumination
5 ERROR duplicate_label nearfield illumination rdfs:label nearfield illumination
6 ERROR missing_ontology_license http://purl.obolibrary.org/obo/fbbi.owl dc:license
7 ERROR missing_ontology_title http://purl.obolibrary.org/obo/fbbi.owl dc11:title
8 WARN missing_definition sample preparation method IAO:0000115
9 WARN missing_definition chemically fixed tissue IAO:0000115
10 WARN missing_definition coagulating-fixative fixed tissue IAO:0000115
11 WARN missing_definition acetone fixed tissue IAO:0000115
12 WARN missing_definition acrolein fixed tissue IAO:0000115
13 WARN missing_definition ethanol fixed tissue IAO:0000115
14 WARN missing_definition methanol fixed tissue IAO:0000115
15 WARN missing_definition crosslinking-fixative fixed tissue IAO:0000115
16 WARN missing_definition ethylene glycol-bis-succinimidyl succinate fixed tissue IAO:0000115
17 WARN missing_definition formaldehyde fixed tissue IAO:0000115
18 WARN missing_definition glutaraldehyde fixed tissue IAO:0000115
19 WARN missing_definition osmium tetroxide fixed tissue IAO:0000115
20 WARN missing_definition cryofixed tissue IAO:0000115
21 WARN missing_definition unfixed tissue IAO:0000115
22 WARN missing_definition embedded tissue IAO:0000115
23 WARN missing_definition tissue in plastic embedment IAO:0000115
24 WARN missing_definition tissue in acrylic resin embedment IAO:0000115
25 WARN missing_definition tissue in epoxy resin embedment IAO:0000115
26 WARN missing_definition tissue in wax embedment IAO:0000115
27 WARN missing_definition tissue in paraffin embedment IAO:0000115
28 WARN missing_definition tissue in polyester wax embedment IAO:0000115
29 WARN missing_definition tissue in polyethylene glycol embedment IAO:0000115
30 WARN missing_definition unembedded tissue IAO:0000115
31 WARN missing_definition whole mounted tissue IAO:0000115
32 WARN missing_definition sectioned tissue IAO:0000115
33 WARN missing_definition cryostat-sectioned tissue IAO:0000115
34 WARN missing_definition hand-sectioned tissue IAO:0000115
35 WARN missing_definition microtome-sectioned tissue IAO:0000115
36 WARN missing_definition vibratome-sectioned tissue IAO:0000115
37 WARN missing_definition visualization method IAO:0000115
38 WARN missing_definition diagram IAO:0000115
39 WARN missing_definition HA peptide tag IAO:0000115
40 WARN missing_definition cresyl fast violet IAO:0000115
41 WARN missing_definition ethidium bromide IAO:0000115
42 WARN missing_definition fuchsin IAO:0000115
43 WARN missing_definition giemsa IAO:0000115
44 WARN missing_definition methyl green IAO:0000115
45 WARN missing_definition methyl violet IAO:0000115
46 WARN missing_definition nitro blue tetrazolium chloride IAO:0000115
47 WARN missing_definition nuclear fast red IAO:0000115
48 WARN missing_definition orcein IAO:0000115
49 WARN missing_definition propidium iodide IAO:0000115
50 WARN missing_definition SYTOX Green IAO:0000115
51 WARN missing_definition toluidine blue IAO:0000115
52 WARN missing_definition acridine orange IAO:0000115
53 WARN missing_definition Hoechst 33342 IAO:0000115
54 WARN missing_definition cationic colloidal gold IAO:0000115
55 WARN missing_definition CMX rosamine (Mitotracker Red) IAO:0000115
56 WARN missing_definition DiOC6 (3,3'-dihexyloxacarbocyanine iodide) IAO:0000115
57 WARN missing_definition 4',6-diamidino-2-phenylindole (DAPI) IAO:0000115
58 WARN missing_definition lucifer yellow IAO:0000115
59 WARN missing_definition methylene blue IAO:0000115
60 WARN missing_definition Nile blue A IAO:0000115
61 WARN missing_definition Nile red IAO:0000115
62 WARN missing_definition pyronine IAO:0000115
63 WARN missing_definition rhodamine 123 IAO:0000115
64 WARN missing_definition rhodamine B IAO:0000115
65 WARN missing_definition SYTO Blue IAO:0000115
66 WARN missing_definition SYTO Green IAO:0000115
67 WARN missing_definition SYTO Orange IAO:0000115
68 WARN missing_definition SYTO Red IAO:0000115
69 WARN missing_definition YO-PRO-1 IAO:0000115
70 WARN missing_definition taxol IAO:0000115
71 WARN missing_definition genetically encoded enzyme IAO:0000115
72 WARN missing_definition beta-galactosidase IAO:0000115
73 WARN missing_definition beta-glucuronidase IAO:0000115
74 WARN missing_definition genetically encoded tag IAO:0000115
75 WARN missing_definition EBFP IAO:0000115
76 WARN missing_definition ECFP IAO:0000115
77 WARN missing_definition EGFP IAO:0000115
78 WARN missing_definition EYFP IAO:0000115
79 WARN missing_definition DsRed IAO:0000115
80 WARN missing_definition c-MYC peptide tag IAO:0000115
81 WARN missing_definition FLAG peptide tag IAO:0000115
82 WARN missing_definition fluor labeled RNA fill IAO:0000115
83 WARN missing_definition 5-SFX fluorescein RNA fill IAO:0000115
84 WARN missing_definition X-rhodamine RNA fill IAO:0000115
85 WARN missing_definition fluor labeled protein fill IAO:0000115
86 WARN missing_definition fluor conjugated actin fill IAO:0000115
87 WARN missing_definition phalloidin IAO:0000115
88 WARN missing_definition fluor conjugated tubulin fill IAO:0000115
89 WARN missing_definition probe for lipid IAO:0000115
90 WARN missing_definition DiA IAO:0000115
91 WARN missing_definition DiD IAO:0000115
92 WARN missing_definition DiI IAO:0000115
93 WARN missing_definition DiO IAO:0000115
94 WARN missing_definition DiR IAO:0000115
95 WARN missing_definition miscellaneous fill IAO:0000115
96 WARN missing_definition biotin ethylenediamine fill IAO:0000115
97 WARN missing_definition cobalt fill IAO:0000115
98 WARN missing_definition silver-intensified cobalt fill IAO:0000115
99 WARN missing_definition metabolically incorporated radioisotope IAO:0000115
100 WARN missing_definition [14]C IAO:0000115
101 WARN missing_definition [32]P IAO:0000115
102 WARN missing_definition [33]P IAO:0000115
103 WARN missing_definition [35]S IAO:0000115
104 WARN missing_definition [3]H IAO:0000115
105 WARN missing_definition vizualization of label conjugated to probe IAO:0000115
106 WARN missing_definition labeled primary antibody IAO:0000115
107 WARN missing_definition alkaline phosphatase IAO:0000115
108 WARN missing_definition horseradish peroxidase IAO:0000115
109 WARN missing_definition primary antibody plus labeled secondary antibody IAO:0000115
110 WARN missing_definition acid phosphatase IAO:0000115
111 WARN missing_definition esterase IAO:0000115
112 WARN missing_definition glucose oxidase IAO:0000115
113 WARN missing_definition aminomethylcoumarin IAO:0000115
114 WARN missing_definition Cascade blue IAO:0000115
115 WARN missing_definition gold IAO:0000115
116 WARN missing_definition DNA probe IAO:0000115
117 WARN missing_definition RNA probe IAO:0000115
118 WARN missing_definition imaging method IAO:0000115
119 WARN missing_definition graphic illustration IAO:0000115
120 WARN missing_definition computer graphic IAO:0000115
121 WARN missing_definition black and white graphic IAO:0000115
122 WARN missing_definition color graphic IAO:0000115
123 WARN missing_definition grey scale graphic IAO:0000115
124 WARN missing_definition camera lucida assisted graphic IAO:0000115
125 WARN missing_definition free hand graphic IAO:0000115
126 WARN missing_definition line art graphic IAO:0000115
127 WARN missing_definition charcoal pencil graphic IAO:0000115
128 WARN missing_definition colored pencil graphic IAO:0000115
129 WARN missing_definition graphite pencil graphic IAO:0000115
130 WARN missing_definition pen and ink graphic IAO:0000115
131 WARN missing_definition painted graphic IAO:0000115
132 WARN missing_definition acrylic painted graphic IAO:0000115
133 WARN missing_definition oil painted graphic IAO:0000115
134 WARN missing_definition pastel painted graphic IAO:0000115
135 WARN missing_definition watercolor painted graphic IAO:0000115
136 WARN missing_definition bright-field microscopy IAO:0000115
137 WARN missing_definition differential interference contrast microscopy IAO:0000115
138 WARN missing_definition fluorescence microscopy IAO:0000115
139 WARN missing_definition phase contrast microscopy IAO:0000115
140 WARN missing_definition polarization microscopy IAO:0000115
141 WARN missing_definition time lapse microscopy IAO:0000115
142 WARN missing_definition confocal microscopy IAO:0000115
143 WARN missing_definition single-spot confocal microscopy IAO:0000115
144 WARN missing_definition spinning disk confocal microscopy IAO:0000115
145 WARN missing_definition two-photon laser scanning microscopy IAO:0000115
146 WARN missing_definition multi-photon microscopy IAO:0000115
147 WARN missing_definition electron microscopy IAO:0000115
148 WARN missing_definition transmission electron microscopy (TEM) IAO:0000115
149 WARN missing_definition X-ray microscopy IAO:0000115
150 WARN missing_definition montage IAO:0000115
151 WARN missing_definition contrast-enhancing method IAO:0000115
152 WARN missing_definition illumination by photons IAO:0000115
153 WARN missing_definition illumination by electrons IAO:0000115
154 WARN missing_definition illumination by acoustic waves IAO:0000115
155 WARN missing_definition illumination by neutrons IAO:0000115
156 WARN missing_definition illumination by ions IAO:0000115
157 WARN missing_definition coherent illumination IAO:0000115
158 WARN missing_definition incoherent illumination IAO:0000115
159 WARN missing_definition nearfield illumination IAO:0000115
160 WARN missing_definition farfield illumination IAO:0000115
161 WARN missing_definition continuous illumination IAO:0000115
162 WARN missing_definition oblique illumination IAO:0000115
163 WARN missing_definition charge coupled device (CCD) IAO:0000115
164 WARN missing_definition photomultiplier tube (PMT) IAO:0000115
165 WARN missing_definition photodiode IAO:0000115
166 WARN missing_definition avalanche photodiode (APD) IAO:0000115
167 WARN missing_definition silicon intensified target tube (SIT) IAO:0000115
168 WARN missing_definition intensified SIT (ISIT) IAO:0000115
169 WARN missing_definition intensified CCD (ICCD) IAO:0000115
170 WARN missing_definition electron multiplying CCD (EMCCD) IAO:0000115
171 WARN missing_definition electron bombardment CCD (EBCCD) IAO:0000115
172 WARN missing_definition film IAO:0000115
173 WARN missing_definition complementary metal oxide semiconductor (CMOS) IAO:0000115
174 WARN missing_definition piezo-electric device IAO:0000115
175 WARN missing_definition wide-field detection IAO:0000115
176 WARN missing_definition narrow-field detection IAO:0000115
177 WARN missing_definition absorption of illumination IAO:0000115
178 WARN missing_definition inelastic scattering IAO:0000115
179 WARN missing_definition elastic scattering IAO:0000115
180 WARN missing_definition refractive index IAO:0000115
181 WARN missing_definition optical path length gradient IAO:0000115
182 WARN missing_definition retardance IAO:0000115
183 WARN missing_definition stiffness IAO:0000115
184 WARN missing_definition electron density IAO:0000115
185 WARN missing_definition fluorescence emission IAO:0000115
186 WARN missing_definition sub-nanosecond time-resolved fluorescence emission) IAO:0000115
187 WARN missing_definition fluorescence polarization (polarization angle resolved fluorescence emission) IAO:0000115
188 WARN missing_definition chemical composition IAO:0000115
189 WARN missing_definition elevation IAO:0000115
190 WARN missing_definition optical method IAO:0000115
191 WARN missing_definition computational method IAO:0000115
192 WARN missing_definition in-focus phase contrast IAO:0000115
193 WARN missing_definition defocus phase contrast IAO:0000115
194 WARN missing_definition Hoffman modulation IAO:0000115
195 WARN missing_definition single sideband edge enhancement (SSBE) IAO:0000115
196 WARN missing_definition interference reflection contrast (IRM) IAO:0000115
197 WARN missing_definition interference contrast IAO:0000115
198 WARN missing_definition polarization contrast IAO:0000115
199 WARN missing_definition structured illumination microscopy (SIM) IAO:0000115
200 WARN missing_definition point-localization method IAO:0000115