| Level | Number of errors |
|---|---|
| WARN | 12 |
| Storey J.D., Dai J.Y., and Leek J.T. (2007) The optimal discovery procedure for large-scale significance testing, with applications to comparative microarray experiments, Biostatistics, 8: 414-432. | 1 |
| Rule | Number of errors |
|---|---|
| annotation_whitespace | 12 |
Click on any term to direct to the term page.
| Row | Level | Rule Name | Subject | Property | Value |
|---|---|---|---|---|---|
| 1 | WARN | annotation_whitespace | OBCS:0000062 | IAO:0000115 | A plan specification that provides a detailed outline of which measurements will be taken at what times, on which material, in what manner, and by whom. Sampling plans should be designed in such a way that the resulting data will contain a representative sample of the parameters of interest and allow for all questions, as stated in the goals, to be answered. |
| 2 | WARN | annotation_whitespace | OBCS:0000118 | IAO:0000115 | A quantitative confidence value that expresses how many times more likely the data are under one model than the other. |
| 3 | WARN | annotation_whitespace | OBCS:0000124 | IAO:0000115 | A statistical data analysis objective where the aim is to make inference using population sample data. |
| 4 | WARN | annotation_whitespace | OBCS:0000126 | IAO:0000119 | WEB: http://en.wikipedia.org/wiki/Random_variable |
| 5 | WARN | annotation_whitespace | OBCS:0000127 | IAO:0000115 | An objective specification where the aim is to collect data. |
| 6 | WARN | annotation_whitespace | OBCS:0000134 | IAO:0000119 | WEB: http://www.stats.gla.ac.uk/steps/glossary/probability_distributions.html#contvar |
| 7 | WARN | annotation_whitespace | OBCS:0000135 | IAO:0000119 | WEB: http://www.stats.gla.ac.uk/steps/glossary/probability_distributions.html#contvar |
| 8 | WARN | annotation_whitespace | OBCS:0000140 | IAO:0000115 | A normalization data transformation that used to create normalized gene expression level from microarray raw data. The raw intensity values are background corrected, log2 transformed and then quantile normalized in the RMA normalization process. |
| 9 | WARN | annotation_whitespace | OBCS:0000141 | IAO:0000119 | http://www.ncbi.nlm.nih.gov/pmc/articles/PMC33173/http://en.wikipedia.org/wiki/Significance_analysis_of_microarrays |
| 10 | WARN | annotation_whitespace | OBCS:0000142 | IAO:0000119 | http://en.wikipedia.org/wiki/Signal-to-noise_ratiohttp://www.ncbi.nlm.nih.gov/pubmed/10521349 |
| 11 | WARN | annotation_whitespace | OBCS:0000147 | IAO:0000119 | http://www.pnas.org/content/102/43/15545.abstract |
| 12 | WARN | annotation_whitespace | OBCS:0000164 | IAO:0000119 | "Storey J.D. (2007) The optimal discovery procedure: A new approach to simultaneous significance testing, Journal of the Royal Statistical Society, Series B, 69: 347-368. |