Level	Rule Name	Subject	Property	Value
ERROR	deprecated_class_reference	ONS:0000003	rdfs:subClassOf	ONS:0000066
ERROR	deprecated_class_reference	ONS:0000034	rdfs:subClassOf	ONS:0000066
ERROR	deprecated_class_reference	ONS:0000054	rdfs:subClassOf	ONS:0000066
ERROR	deprecated_class_reference	ONS:0000094	rdfs:subClassOf	ONS:1000008
ERROR	deprecated_class_reference	ONS:0000094	rdfs:subClassOf	ONS:2000002
ERROR	deprecated_class_reference	ONS:0000094	rdfs:subClassOf	ONS:2000003
ERROR	deprecated_class_reference	ONS:0000094	rdfs:subClassOf	ONS:2000004
ERROR	deprecated_class_reference	ONS:0000094	rdfs:subClassOf	ONS:2000005
ERROR	deprecated_class_reference	ONS:2000002	rdfs:subClassOf	ONS:0000094
ERROR	deprecated_class_reference	ONS:2000003	rdfs:subClassOf	ONS:0000094
ERROR	deprecated_class_reference	ONS:2000003	rdfs:subClassOf	ONS:2000019
ERROR	deprecated_class_reference	ONS:2000004	rdfs:subClassOf	ONS:0000094
ERROR	deprecated_class_reference	ONS:2000005	rdfs:subClassOf	ONS:0000094
ERROR	deprecated_class_reference	ONS:2000005	rdfs:subClassOf	ONS:2000036
ERROR	deprecated_class_reference	ONS:2000005	rdfs:subClassOf	ONS:2000037
ERROR	deprecated_class_reference	ONS:2000005	rdfs:subClassOf	ONS:2000038
ERROR	deprecated_class_reference	ONS:2000005	rdfs:subClassOf	ONS:2000039
ERROR	deprecated_class_reference	ONS:2000005	rdfs:subClassOf	ONS:2000040
ERROR	deprecated_class_reference	ONS:2000005	rdfs:subClassOf	ONS:2000041
ERROR	deprecated_class_reference	ONS:2000005	rdfs:subClassOf	ONS:2000042
ERROR	deprecated_class_reference	ONS:2000005	rdfs:subClassOf	ONS:2000043
ERROR	deprecated_class_reference	ONS:2000005	rdfs:subClassOf	ONS:2000044
ERROR	deprecated_class_reference	ONS:2000005	rdfs:subClassOf	ONS:2000045
ERROR	deprecated_class_reference	ONS:2000019	rdfs:subClassOf	ONS:2000003
ERROR	deprecated_class_reference	ONS:2000019	rdfs:subClassOf	ONS:2000020
ERROR	deprecated_class_reference	ONS:2000019	rdfs:subClassOf	ONS:2000021
ERROR	deprecated_class_reference	ONS:2000019	rdfs:subClassOf	ONS:2000022
ERROR	deprecated_class_reference	ONS:2000019	rdfs:subClassOf	ONS:2000023
ERROR	deprecated_class_reference	ONS:2000019	rdfs:subClassOf	ONS:2000024
ERROR	deprecated_class_reference	ONS:2000019	rdfs:subClassOf	ONS:2000025
ERROR	deprecated_class_reference	ONS:2000019	rdfs:subClassOf	ONS:2000026
ERROR	deprecated_class_reference	ONS:2000020	rdfs:subClassOf	ONS:2000019
ERROR	deprecated_class_reference	ONS:2000021	rdfs:subClassOf	ONS:2000019
ERROR	deprecated_class_reference	ONS:2000022	rdfs:subClassOf	ONS:2000019
ERROR	deprecated_class_reference	ONS:2000023	rdfs:subClassOf	ONS:2000019
ERROR	deprecated_class_reference	ONS:2000024	rdfs:subClassOf	ONS:2000019
ERROR	deprecated_class_reference	ONS:2000025	rdfs:subClassOf	ONS:2000019
ERROR	deprecated_class_reference	ONS:2000026	rdfs:subClassOf	ONS:2000019
ERROR	deprecated_class_reference	ONS:2000036	rdfs:subClassOf	ONS:2000005
ERROR	deprecated_class_reference	ONS:2000037	rdfs:subClassOf	ONS:2000005
ERROR	deprecated_class_reference	ONS:2000038	rdfs:subClassOf	15154b44-58a5-4f3c-aa67-7aa3f744f8edgenid332
ERROR	deprecated_class_reference	ONS:2000038	rdfs:subClassOf	ONS:2000005
ERROR	deprecated_class_reference	ONS:2000039	rdfs:subClassOf	ONS:2000005
ERROR	deprecated_class_reference	ONS:2000040	rdfs:subClassOf	ONS:2000005
ERROR	deprecated_class_reference	ONS:2000041	rdfs:subClassOf	15154b44-58a5-4f3c-aa67-7aa3f744f8edgenid333
ERROR	deprecated_class_reference	ONS:2000041	rdfs:subClassOf	ONS:2000005
ERROR	deprecated_class_reference	ONS:2000042	rdfs:subClassOf	ONS:2000005
ERROR	deprecated_class_reference	ONS:2000043	rdfs:subClassOf	ONS:2000005
ERROR	deprecated_class_reference	ONS:2000044	rdfs:subClassOf	15154b44-58a5-4f3c-aa67-7aa3f744f8edgenid334
ERROR	deprecated_class_reference	ONS:2000044	rdfs:subClassOf	ONS:2000005
ERROR	deprecated_class_reference	ONS:2000045	rdfs:subClassOf	15154b44-58a5-4f3c-aa67-7aa3f744f8edgenid335
ERROR	deprecated_class_reference	ONS:2000045	rdfs:subClassOf	ONS:2000005
ERROR	duplicate_definition	ONS:0000136	IAO:0000115	This is a high-level term with the purpose of organization of more granular children term. Should not be used in annotation, favoring more specific sub-classes@en
ERROR	duplicate_definition	ONS:0000137	IAO:0000115	This is a high-level term with the purpose of organization of more granular children term. Should not be used in annotation, favoring more specific sub-classes@en
ERROR	duplicate_definition	ONS:0000138	IAO:0000115	This is a high-level term with the purpose of organization of more granular children term. Should not be used in annotation, favoring more specific sub-classes@en
ERROR	duplicate_definition	ONS:0000134	IAO:0000115	microbial culture responsible for the beginning of the fermentation process@en
ERROR	duplicate_definition	ONS:0000158	IAO:0000115	microbial culture responsible for the beginning of the fermentation process@en
WARN	annotation_whitespace	ONS:1000011	IAO:0000117	https://github.com/FoodOntology/joint-food-ontology-wg
WARN	annotation_whitespace	ONS:1000011	IAO:0000117	Leigh Carmody 
WARN	annotation_whitespace	ONS:1000012	IAO:0000117	https://github.com/FoodOntology/joint-food-ontology-wg
WARN	annotation_whitespace	ONS:1000012	IAO:0000117	Leigh Carmody 
WARN	annotation_whitespace	ONS:1000034	IAO:0000119	http://www.fao.org/organicag/oa-faq/oa-faq1/en/
WARN	annotation_whitespace	ONS:1000034	IAO:0000119	https://extension.arizona.edu/sites/extension.arizona.edu/files/pubs/az1603.pdf 
WARN	annotation_whitespace	ONS:1000036	IAO:0000117	https://github.com/FoodOntology/joint-food-ontology-wg
WARN	annotation_whitespace	ONS:1000036	IAO:0000117	Leigh Carmody 
WARN	annotation_whitespace	ONS:1000036	IAO:0000119	 PMID:27759811 
WARN	annotation_whitespace	ONS:1000036	IAO:0000119	 PMID:28701250 
WARN	annotation_whitespace	ONS:1000036	IAO:0000119	https://www.healthdirect.gov.au/ketogenic-diet
WARN	annotation_whitespace	ONS:1000036	IAO:0000119	PMID:23419562 
WARN	annotation_whitespace	ONS:1000037	IAO:0000117	https://github.com/FoodOntology/joint-food-ontology-wg
WARN	annotation_whitespace	ONS:1000037	IAO:0000117	Leigh Carmody 
WARN	annotation_whitespace	ONS:1000038	IAO:0000117	https://github.com/FoodOntology/joint-food-ontology-wg
WARN	annotation_whitespace	ONS:1000038	IAO:0000117	Leigh Carmody 
WARN	annotation_whitespace	ONS:1000040	IAO:0000117	https://github.com/FoodOntology/joint-food-ontology-wg
WARN	annotation_whitespace	ONS:1000040	IAO:0000117	Leigh Carmody 
WARN	annotation_whitespace	ONS:1000040	IAO:0000119	https://en.wikipedia.org/wiki/Low-carbohydrate_diet
WARN	annotation_whitespace	ONS:1000040	IAO:0000119	PMID:18635428 
WARN	annotation_whitespace	ONS:1000042	IAO:0000117	https://github.com/FoodOntology/joint-food-ontology-wg
WARN	annotation_whitespace	ONS:1000042	IAO:0000117	Leigh Carmody 
WARN	annotation_whitespace	ONS:1000061	IAO:0000117	https://orcid.org/0000-0001-9125-4337
WARN	annotation_whitespace	ONS:1000061	IAO:0000117	https://github.com/FoodOntology/joint-food-ontology-wg 
WARN	annotation_whitespace	ONS:2000036	IAO:0000117	https://github.com/FoodOntology/joint-food-ontology-wg
WARN	annotation_whitespace	ONS:2000036	IAO:0000117	Leigh Carmody 
WARN	annotation_whitespace	ONS:2000037	IAO:0000117	https://github.com/FoodOntology/joint-food-ontology-wg
WARN	annotation_whitespace	ONS:2000037	IAO:0000117	Leigh Carmody 
WARN	annotation_whitespace	ONS:2000038	IAO:0000117	https://github.com/FoodOntology/joint-food-ontology-wg
WARN	annotation_whitespace	ONS:2000038	IAO:0000117	Leigh Carmody 
WARN	annotation_whitespace	ONS:2000040	IAO:0000117	https://github.com/FoodOntology/joint-food-ontology-wg
WARN	annotation_whitespace	ONS:2000040	IAO:0000117	Leigh Carmody 
WARN	annotation_whitespace	ONS:2000040	IAO:0000119	https://en.wikipedia.org/wiki/Low-carbohydrate_diet
WARN	annotation_whitespace	ONS:2000040	IAO:0000119	PMID:18635428 
WARN	annotation_whitespace	ONS:2000042	IAO:0000117	https://github.com/FoodOntology/joint-food-ontology-wg
WARN	annotation_whitespace	ONS:2000042	IAO:0000117	Leigh Carmody 
WARN	duplicate_label_synonym	ONS:0000115	oboInOwl:hasExactSynonym	average daily nutrient intake level@en
WARN	duplicate_label_synonym	ONS:1000013	oboInOwl:hasExactSynonym	time-restricted feeding@en
WARN	missing_definition	ONS:0000104	IAO:0000115	
WARN	missing_definition	ONS:0000109	IAO:0000115	
WARN	missing_definition	ONS:0000178	IAO:0000115	
WARN	missing_obsolete_label	ONS:0000034	rdfs:label	subject informations@en
WARN	missing_obsolete_label	ONS:0000054	rdfs:label	Subject tab@en
WARN	missing_obsolete_label	ONS:0000055	rdfs:label	Event tab@en
INFO	lowercase_definition	ONS:0000009	IAO:0000115	time spent in light physical activity in minutes/day derived from questionnaire data@en
INFO	lowercase_definition	ONS:0000110	IAO:0000115	any type of assay that can be performed in the context of a nutritional study@en
INFO	lowercase_definition	ONS:0000111	IAO:0000115	an assay that is aimed at discovering new potential metabolites as food consumption biomarkers, or to measure/validate known food consumption biomarkers in a biological sample (e.g. urine, blood, serum, feces).@en
INFO	lowercase_definition	ONS:0000122	IAO:0000115	unselected, autochthonous microbial consortia that initiates the fermentation@en
INFO	lowercase_definition	ONS:0000123	IAO:0000115	microorganisms selected for specific technological and sensory properties that are inoculated directly into food materials used to initiate the fermentation process and in order to bring about desired and predictable changes in the finished product@en
INFO	lowercase_definition	ONS:0000124	IAO:0000115	microorganisms naturally present in the raw food or processing environment@en
INFO	lowercase_definition	ONS:0000125	IAO:0000115	the role of a material entity that is the vehicle for introduction of one or more microorganisms (representing starter culture) into a suitable substrate to initiate the fermentation process@en
INFO	lowercase_definition	ONS:0000126	IAO:0000115	a complex matrix composed of a polysaccharide (kefiran) in association with bacteria and yeasts formed during kefir fermentation@en
INFO	lowercase_definition	ONS:0000127	IAO:0000115	the addition of a small amount of a previously fermented batch to the raw food, with the aim of initiating a new fermentation process@en
INFO	lowercase_definition	ONS:0000128	IAO:0000115	the food choice management process refers to the complex decision-making process an organism carry out to realize choices about which food to be consumed, and to the choices regarding quantity and mode of consumption of foods.@en
INFO	lowercase_definition	ONS:0000129	IAO:0000115	a food choice management process resulting in healthy food choice@en
INFO	lowercase_definition	ONS:0000130	IAO:0000115	a food choice management process resulting in unhealthy food choice@en
INFO	lowercase_definition	ONS:0000131	IAO:0000115	a determinant of diet is any factor that drive the food choices of an organism@en
INFO	lowercase_definition	ONS:0000132	IAO:0000115	food choice refers to any decision an organism makes regarding food and diet. It both refers to the selection of specific foods to be consumed by an organism, from a variety of available options, and to the choices regarding quantity and mode of consumption of foods. Food choice are direct consequence of the food management process, and depends on a variety of determinants of diet@en
INFO	lowercase_definition	ONS:0000133	IAO:0000115	the palatability of a food refers to its capacity of triggering a reward (i.e. hedonic reward, or pleasure, via a stimulation of the dopamine reward pathway) upon consumption. This property can be related to various aspects of food, usually related to fats and sugars content.@en
INFO	lowercase_definition	ONS:0000134	IAO:0000115	microbial culture responsible for the beginning of the fermentation process@en
INFO	lowercase_definition	ONS:0000135	IAO:0000115	microbial cultures that do not take part to the fermentation process but contribute to the development of flavours, aroma and organoleptic properties during maturation/ripening through other metabolic pathways@en
INFO	lowercase_definition	ONS:0000139	IAO:0000115	a process in the cheese-making consisting of the storage of cheese in controlled temperature and condition, for defined amount of time. The process is associated to microbial activities such as proteases and lipases which change the morphology and physical texture of the cheese as well as develop taste and flavor of the final  product@en
INFO	lowercase_definition	ONS:0000140	IAO:0000115	the set of reactions leading to the conversion of fats (triglycerides) into free fatty acids, monoacylglycerol, diacylglycerol, and glycerol during the fermentation process@en
INFO	lowercase_definition	ONS:0000141	IAO:0000115	the set of reactions leading to the hydrolysis of milk proteins into peptides during the food fermentation process@en
INFO	lowercase_definition	ONS:0000142	IAO:0000115	the set of reactions leading to the conversion of glucose into pyruvic acid, which is substrate for the fermentation processes@en
INFO	lowercase_definition	ONS:0000144	IAO:0000115	consortium of living microorganisms present in kefir, characterized by bacteria and yeast components (has part)@en
INFO	lowercase_definition	ONS:0000146	IAO:0000115	vital biomass containing microorganisms added to start the fermentation process@en
INFO	lowercase_definition	ONS:0000147	IAO:0000115	complex matrix composed of an exopolysaccharide in association with bacteria and yeast cells added to milk for kefir production@en
INFO	lowercase_definition	ONS:0000148	IAO:0000115	the procedure in which a small amount of the finished or intermediate fermentation product is used to inoculate a new batch with the aim of starting a new fermentation process@en
INFO	lowercase_definition	ONS:0000149	IAO:0000115	kefir recipe includes and defines the set of ingredients and procedures that should be employed to obtain kefir@en
INFO	lowercase_definition	ONS:0000150	IAO:0000115	consortium of living microrganisms present in whey, characterized by bacteria and yeast components (has part)@en
INFO	lowercase_definition	ONS:0000151	IAO:0000115	mixture of milk originating from different animal species or from different milking times@en
INFO	lowercase_definition	ONS:0000152	IAO:0000115	the process of destabilization of casein micelles, which flocculate and aggregate to form a gel enclosing the soluble milk components. It is caused by acidification, by enzymatic activities or by the combination of the two processes@en
INFO	lowercase_definition	ONS:0000153	IAO:0000115	the set of reactions leading to the conversion of carbohydrates into organic acids by the enzymatic activity of starter microbes in the production of Parmigiano Reggiano. It can also be extended to the proteolitic and lipolytic reactions characterizing maturation and ripening steps.@en
INFO	lowercase_definition	ONS:0000155	IAO:0000115	the result of moulding and final pressing of Parmigiano Reggiano mass retrieved from cauldron@en
INFO	lowercase_definition	ONS:0000156	IAO:0000115	the set of reactions leading to the conversion of carbohydrates into organic acids, ethanol and CO2 by the enzymatic activity in the absence of oxygen@en
INFO	lowercase_definition	ONS:0000157	IAO:0000115	foods or beverages produced through controlled microbial growth, and the conversion of food components through enzymatic action@en
INFO	lowercase_definition	ONS:0000158	IAO:0000115	microbial culture responsible for the beginning of the fermentation process@en
INFO	lowercase_definition	ONS:0000159	IAO:0000115	a chemical and/or physical factor that exerts selection pressure and brings about natural selection within microbiota components@en
INFO	lowercase_definition	ONS:0000160	IAO:0000115	the process in which the cheese is placed in a mould giving rise to it its final shape, and immersed in a saturated solution of water and salt@en
INFO	lowercase_definition	ONS:0000161	IAO:0000115	a heating process in which the curd is cooked at defined temperature for a defined amount of time. As a result the curd sink to the bottom of the cauldron forming a single mass@en
INFO	lowercase_definition	ONS:0000162	IAO:0000115	the microbial consortium associated to curd@en
INFO	lowercase_definition	ONS:0000163	IAO:0000115	a hard, cooked, brittle cheese with a long ripening time (minimum of 12 months), produced using raw semiskim high-quality cow milk, natural fermented whey, calf rennet and sodium chloride, designed as PDO@en
INFO	lowercase_definition	ONS:0000164	IAO:0000115	a heating process were curd is cooked at 55 °C for 12 minutes, after which the cheesy granules sink to the bottom of the cauldron forming a single mass@en
INFO	lowercase_definition	ONS:0000165	IAO:0000115	the process in which the shaped cheese is stored in controlled temperature condition and for defined amount of time to give rise to the ripened cheese@en
INFO	lowercase_definition	ONS:0000166	IAO:0000115	the process during which the parmigiano reggiano cheese wheels are stored at 18-20 °C for a minimum of 12 months giving rise to the ripened parmigiano reggiano@en
INFO	lowercase_definition	ONS:0000167	IAO:0000115	the microbial consortium associated to parmigiano reggiano cheese@en
INFO	lowercase_definition	ONS:0000168	IAO:0000115	the process in which the cheese, wrapped in typical linen cloth, is placed in a mould that gives it its final shape and immersed in a saturated solution of water and salt.@en
INFO	lowercase_definition	ONS:0000169	IAO:0000115	the result of moulding and final pressing in cheese-making@en
INFO	lowercase_definition	ONS:0000170	IAO:0000115	mixture obtained by combining milk from morning milking with milk from previous evening milking and used as initial ingredient in Parmigiano Reggiano making@en
INFO	lowercase_definition	ONS:0000171	IAO:0000115	consortium of living microrganisms present in milk before processing, characterized by bacteria and yeast components (has part)@en
INFO	lowercase_definition	ONS:0000172	IAO:0000115	the role of a material entity, generally a chemical compound, such as the material entity is not suitable for consumption by a defined group of individuals. This role has a causal relation (is determined by) with another material entity such that it exerts a strong causal influence on the role, and its removal cause the termination of the existence of the role@en
INFO	lowercase_definition	ONS:0000173	IAO:0000115	the role of a material entity, generally a chemical compound, such as the material entity is unfit for consumption by a defined group of individuals. This role has a causal relation (is determined by) with another material entity such that it exerts a strong causal influence on the role, and its removal cause the termination of the existence of the role@en
INFO	lowercase_definition	ONS:0000174	IAO:0000115	the ratio between the vapor pressure of the food, when in a completely undisturbed balance with the surrounding air media, and the vapor pressure of distilled water under identical conditions@en
INFO	lowercase_definition	ONS:0000175	IAO:0000115	whey from the previous day manufacture containing the consortium of living microorganisms, added to start the fermentation process@en
INFO	lowercase_definition	ONS:0000176	IAO:0000115	the procedure in which a small amount of the finished or intermediate kefir is used to inoculate a new batch with the aim of starting a new fermentation process@en
INFO	lowercase_definition	ONS:0000177	IAO:0000115	the procedure in which a small amount of whey product of the parmigiano reggiano milk coagulation is used to inoculate a new batch with the aim of starting a new fermentation process@en
INFO	lowercase_definition	ONS:1000025	IAO:0000115	primarily a plant-based diet but includes meat, dairy, eggs, poultry and fish on occasion or in small quantities@en
INFO	lowercase_definition	ONS:1000065	IAO:0000115	the diet resulting from the lifestyle adaptation following the industrial revolution. It is often associated with western countries, but is increasingly becoming adopted also in other geographic areas. It is known to be rich in red and processed meats, sweets, fried foods, and refined grains while being poor in fruits, vegetables, legumes, fish, poultry, and whole grains. In terms of micronutrients, this diet is usually rich in salt, yet poor in other minerals and vitamins, whereas in terms of fats, it is high in saturated and trans-fatty acids, and low in mono- and polyunsaturated fatty acids. Its fibre and complex carbohydrates contents are also very low due to the high consumption of refined sugars instead of whole-grain foods.@en
INFO	lowercase_definition	ONS:1000066	IAO:0000115	the diet characteristic of the lifestyle in isolated/rural areas, commonly in developing countries. It is mainly composed of naturally available food products, including fresh animal protein and vegetables while excluding industrially processed foods. Nevertheless, it is common to use traditional food processing methods to improve nutrient availability, digestibility or to increase conservation time to avoid scarcity. These methods include soaking, fermentation, cooking, pounding, and sprouting.@en
