| Row |
Level |
Rule Name |
Subject |
Property |
Value |
| 0 |
ERROR |
deprecated_class_reference |
SO:0001058 |
rdfs:subClassOf |
SO:0001055 |
| 1 |
ERROR |
duplicate_definition |
SO:0000428 |
IAO:0000115 |
The U5 segment of the three-prime long terminal repeat. |
| 2 |
ERROR |
duplicate_definition |
SO:0000432 |
IAO:0000115 |
The U5 segment of the three-prime long terminal repeat. |
| 3 |
ERROR |
duplicate_definition |
SO:0000429 |
IAO:0000115 |
The U3 segment of the three-prime long terminal repeat. |
| 4 |
ERROR |
duplicate_definition |
SO:0000431 |
IAO:0000115 |
The U3 segment of the three-prime long terminal repeat. |
| 5 |
ERROR |
duplicate_definition |
SO:0000753 |
IAO:0000115 |
The region of sequence that has been inserted and is being propagated by the clone. |
| 6 |
ERROR |
duplicate_definition |
SO:0000785 |
IAO:0000115 |
The region of sequence that has been inserted and is being propagated by the clone. |
| 7 |
ERROR |
duplicate_definition |
SO:0000427 |
IAO:0000115 |
The R segment of the three-prime long terminal repeat. |
| 8 |
ERROR |
duplicate_definition |
SO:0000430 |
IAO:0000115 |
The R segment of the three-prime long terminal repeat. |
| 9 |
ERROR |
duplicate_definition |
SO:0002195 |
IAO:0000115 |
The pseudogene has no parent. It is the original gene, which is functional in some species but disrupted in some way (indels, mutation, recombination) in another species or strain. |
| 10 |
ERROR |
duplicate_definition |
SO:0002199 |
IAO:0000115 |
The pseudogene has no parent. It is the original gene, which is functional in some species but disrupted in some way (indels, mutation, recombination) in another species or strain. |
| 11 |
ERROR |
duplicate_definition |
SO:0002194 |
IAO:0000115 |
The pseudogene has arisen from a copy of the parent gene by duplication followed by accumulation of random mutation. The changes, compared to their functional homolog, include insertions, deletions, premature stop codons, frameshifts and a higher proportion of non-synonymous versus synonymous substitutions. |
| 12 |
ERROR |
duplicate_definition |
SO:0002198 |
IAO:0000115 |
The pseudogene has arisen from a copy of the parent gene by duplication followed by accumulation of random mutation. The changes, compared to their functional homolog, include insertions, deletions, premature stop codons, frameshifts and a higher proportion of non-synonymous versus synonymous substitutions. |
| 13 |
ERROR |
duplicate_definition |
SO:0002193 |
IAO:0000115 |
The pseudogene has arisen by reverse transcription of a mRNA into cDNA, followed by reintegration into the genome. Therefore, it has lost any intron/exon structure, and it might have a pseudo-polyA-tail. |
| 14 |
ERROR |
duplicate_definition |
SO:0002197 |
IAO:0000115 |
The pseudogene has arisen by reverse transcription of a mRNA into cDNA, followed by reintegration into the genome. Therefore, it has lost any intron/exon structure, and it might have a pseudo-polyA-tail. |
| 15 |
ERROR |
duplicate_definition |
SO:0000960 |
IAO:0000115 |
Structural unit composed of a self-replicating, single-stranded, circular DNA molecule. |
| 16 |
ERROR |
duplicate_definition |
SO:0000966 |
IAO:0000115 |
Structural unit composed of a self-replicating, single-stranded, circular DNA molecule. |
| 17 |
ERROR |
duplicate_definition |
SO:0000737 |
IAO:0000115 |
DNA belonging to the genome of a mitochondria. |
| 18 |
ERROR |
duplicate_definition |
SO:0001032 |
IAO:0000115 |
DNA belonging to the genome of a mitochondria. |
| 19 |
ERROR |
duplicate_definition |
SO:0000030 |
IAO:0000115 |
A type of non-canonical base-pairing. |
| 20 |
ERROR |
duplicate_definition |
SO:0000501 |
IAO:0000115 |
A type of non-canonical base-pairing. |
| 21 |
ERROR |
duplicate_definition |
SO:0000283 |
IAO:0000115 |
A transposable_element that is engineered and foreign. |
| 22 |
ERROR |
duplicate_definition |
SO:0000799 |
IAO:0000115 |
A transposable_element that is engineered and foreign. |
| 23 |
ERROR |
duplicate_definition |
SO:0000107 |
IAO:0000115 |
A single stranded oligo used for polymerase chain reaction. |
| 24 |
ERROR |
duplicate_definition |
SO:0000121 |
IAO:0000115 |
A single stranded oligo used for polymerase chain reaction. |
| 25 |
ERROR |
duplicate_definition |
SO:0000132 |
IAO:0000115 |
A single stranded oligo used for polymerase chain reaction. |
| 26 |
ERROR |
duplicate_definition |
SO:0001599 |
IAO:0000115 |
A sequence variant that changes the resulting polypeptide structure. |
| 27 |
ERROR |
duplicate_definition |
SO:0001600 |
IAO:0000115 |
A sequence variant that changes the resulting polypeptide structure. |
| 28 |
ERROR |
duplicate_definition |
SO:0001898 |
IAO:0000115 |
A repeat region which is part of the regional centromere outer repeat region. |
| 29 |
ERROR |
duplicate_definition |
SO:0001899 |
IAO:0000115 |
A repeat region which is part of the regional centromere outer repeat region. |
| 30 |
ERROR |
duplicate_definition |
SO:0000226 |
IAO:0000115 |
A primary transcript encoding seryl tRNA (SO:000269). |
| 31 |
ERROR |
duplicate_definition |
SO:0005856 |
IAO:0000115 |
A primary transcript encoding seryl tRNA (SO:000269). |
| 32 |
ERROR |
duplicate_definition |
SO:0001763 |
IAO:0000115 |
A physical quality which inheres to the variant by virtue of the number instances of the variant within a population. |
| 33 |
ERROR |
duplicate_definition |
SO:0001764 |
IAO:0000115 |
A physical quality which inheres to the variant by virtue of the number instances of the variant within a population. |
| 34 |
ERROR |
duplicate_definition |
SO:0100004 |
IAO:0000115 |
A motif of 3 consecutive residues with dihedral angles as follows: res i: phi -90 bounds -120 to -60, res i: psi -10 bounds -50 to 30, res i+1: phi -75 bounds -100 to -50, res i+1: psi 140 bounds 110 to 170. An extra restriction of the length of the O to O distance would be useful, that it be less than 5 Angstrom. More precisely these two oxygens are the main chain carbonyl oxygen atoms of residues i-1 and i+1. |
| 35 |
ERROR |
duplicate_definition |
SO:0100006 |
IAO:0000115 |
A motif of 3 consecutive residues with dihedral angles as follows: res i: phi -90 bounds -120 to -60, res i: psi -10 bounds -50 to 30, res i+1: phi -75 bounds -100 to -50, res i+1: psi 140 bounds 110 to 170. An extra restriction of the length of the O to O distance would be useful, that it be less than 5 Angstrom. More precisely these two oxygens are the main chain carbonyl oxygen atoms of residues i-1 and i+1. |
| 36 |
ERROR |
duplicate_definition |
SO:0000054 |
IAO:0000115 |
A kind of chromosome variation where the chromosome complement is not an exact multiple of the haploid number. |
| 37 |
ERROR |
duplicate_definition |
SO:1000182 |
IAO:0000115 |
A kind of chromosome variation where the chromosome complement is not an exact multiple of the haploid number. |
| 38 |
ERROR |
duplicate_definition |
SO:0000816 |
IAO:0000115 |
A gene that rescues. |
| 39 |
ERROR |
duplicate_definition |
SO:0000818 |
IAO:0000115 |
A gene that rescues. |
| 40 |
ERROR |
duplicate_definition |
SO:0000456 |
IAO:0000115 |
A gene that is recombinationally rearranged. |
| 41 |
ERROR |
duplicate_definition |
SO:0000940 |
IAO:0000115 |
A gene that is recombinationally rearranged. |
| 42 |
ERROR |
duplicate_definition |
SO:0005847 |
IAO:0000115 |
A gene that is a member of a gene cassette, which is a mobile genetic element. |
| 43 |
ERROR |
duplicate_definition |
SO:0005848 |
IAO:0000115 |
A gene that is a member of a gene cassette, which is a mobile genetic element. |
| 44 |
ERROR |
duplicate_definition |
SO:0000051 |
IAO:0000115 |
A DNA sequence used experimentally to detect the presence or absence of a complementary nucleic acid. |
| 45 |
ERROR |
duplicate_definition |
SO:0000328 |
IAO:0000115 |
A DNA sequence used experimentally to detect the presence or absence of a complementary nucleic acid. |
| 46 |
ERROR |
duplicate_definition |
SO:0001914 |
IAO:0000115 |
A DNA motif that is found in eukaryotic rDNA repeats, and is a site of replication fork pausing. |
| 47 |
ERROR |
duplicate_definition |
SO:0002021 |
IAO:0000115 |
A DNA motif that is found in eukaryotic rDNA repeats, and is a site of replication fork pausing. |
| 48 |
ERROR |
duplicate_definition |
SO:0002189 |
IAO:0000115 |
A (unitary) pseudogene that is stable in the population but importantly it has a functional alternative allele also in the population. i.e., one strain may have the gene, another strain may have the pseudogene. MHC haplotypes have allelic pseudogenes. |
| 49 |
ERROR |
duplicate_definition |
SO:0002196 |
IAO:0000115 |
A (unitary) pseudogene that is stable in the population but importantly it has a functional alternative allele also in the population. i.e., one strain may have the gene, another strain may have the pseudogene. MHC haplotypes have allelic pseudogenes. |
| 50 |
ERROR |
duplicate_definition |
SO:0002200 |
IAO:0000115 |
A (unitary) pseudogene that is stable in the population but importantly it has a functional alternative allele also in the population. i.e., one strain may have the gene, another strain may have the pseudogene. MHC haplotypes have allelic pseudogenes. |
| 51 |
ERROR |
duplicate_label |
SO:0001957 |
rdfs:label |
RNA_stability_element |
| 52 |
ERROR |
duplicate_label |
SO:0001979 |
rdfs:label |
RNA_stability_element |
| 53 |
ERROR |
duplicate_label |
SO:0001053 |
rdfs:label |
nested_transposon |
| 54 |
ERROR |
duplicate_label |
SO:0001648 |
rdfs:label |
nested_transposon |
| 55 |
ERROR |
duplicate_label |
SO:0001052 |
rdfs:label |
nested_repeat |
| 56 |
ERROR |
duplicate_label |
SO:0001649 |
rdfs:label |
nested_repeat |
| 57 |
ERROR |
duplicate_label |
SO:0000179 |
rdfs:label |
clone_insert_start |
| 58 |
ERROR |
duplicate_label |
SO:0000767 |
rdfs:label |
clone_insert_start |
| 59 |
ERROR |
duplicate_label |
SO:0000437 |
rdfs:label |
assortment_derived_duplication |
| 60 |
ERROR |
duplicate_label |
SO:0000800 |
rdfs:label |
assortment_derived_duplication |
| 61 |
ERROR |
duplicate_label |
SO:0000554 |
rdfs:label |
assortment_derived_deficiency_plus_duplication |
| 62 |
ERROR |
duplicate_label |
SO:0000801 |
rdfs:label |
assortment_derived_deficiency_plus_duplication |
| 63 |
ERROR |
duplicate_label |
SO:0000052 |
rdfs:label |
assortment_derived_deficiency |
| 64 |
ERROR |
duplicate_label |
SO:0000802 |
rdfs:label |
assortment_derived_deficiency |
| 65 |
ERROR |
duplicate_label |
SO:0000058 |
rdfs:label |
assortment_derived_aneuploid |
| 66 |
ERROR |
duplicate_label |
SO:0000803 |
rdfs:label |
assortment_derived_aneuploid |
| 67 |
ERROR |
missing_ontology_description |
http://purl.obolibrary.org/obo/so.owl |
dc:description |
|
| 68 |
ERROR |
missing_ontology_license |
http://purl.obolibrary.org/obo/so.owl |
dc:license |
|
| 69 |
ERROR |
missing_ontology_title |
http://purl.obolibrary.org/obo/so.owl |
dc:title |
|
| 70 |
WARN |
annotation_whitespace |
SO:0000621 |
IAO:0000115 |
This type of promoter recruits RNA pol III to transcribe predomitly noncoding RNAs. This promoter contains a proximal sequence element (PSE) and a TATA box upstream of the gene that it regulates. Transcription can also be activated by a distal sequence element (DSE), which is located further upstream. |
| 71 |
WARN |
annotation_whitespace |
SO:0001228 |
oboInOwl:hasExactSynonym |
D |
| 72 |
WARN |
annotation_whitespace |
SO:0001229 |
oboInOwl:hasExactSynonym |
Y |
| 73 |
WARN |
annotation_whitespace |
SO:0001317 |
oboInOwl:hasExactSynonym |
Q |
| 74 |
WARN |
annotation_whitespace |
SO:0001401 |
oboInOwl:hasExactSynonym |
modified L-leucine |
| 75 |
WARN |
annotation_whitespace |
SO:0001404 |
oboInOwl:hasExactSynonym |
modified L-proline |
| 76 |
WARN |
annotation_whitespace |
SO:0001448 |
IAO:0000115 |
A polar, hydorophilic amino acid encoded by the codons CAA and CAG. |
| 77 |
WARN |
annotation_whitespace |
SO:0001473 |
oboInOwl:hasExactSynonym |
miRNA antiguide |
| 78 |
WARN |
annotation_whitespace |
SO:0001888 |
oboInOwl:hasExactSynonym |
TFBS fusion |
| 79 |
WARN |
annotation_whitespace |
SO:0001892 |
oboInOwl:hasExactSynonym |
TFBS amplification |
| 80 |
WARN |
annotation_whitespace |
SO:0001913 |
oboInOwl:hasExactSynonym |
bacterial RNApol promoter sigma ecf |
| 81 |
WARN |
annotation_whitespace |
SO:0001947 |
oboInOwl:hasExactSynonym |
H3R2me1 |
| 82 |
WARN |
annotation_whitespace |
SO:0001950 |
oboInOwl:hasExactSynonym |
H4K4me3 |
| 83 |
WARN |
annotation_whitespace |
SO:0001996 |
oboInOwl:hasExactSynonym |
extended intronic splice region |
| 84 |
WARN |
annotation_whitespace |
SO:0002044 |
oboInOwl:hasExactSynonym |
TEA Consensus Sequence |
| 85 |
WARN |
annotation_whitespace |
SO:0002254 |
IAO:0000115 |
The loop portion of a stem loop, which is not folded back upon itself. |
| 86 |
WARN |
annotation_whitespace |
SO:0002255 |
IAO:0000115 |
The portion of a stem loop where the RNA is folded back upon itself. |
| 87 |
WARN |
annotation_whitespace |
SO:0002296 |
IAO:0000115 |
The possible discontinuous stretch of DNA that is the combination of one or several TFRSs whose bound TFs work jointly in the regulation of a promoter. |
| 88 |
WARN |
duplicate_exact_synonym |
SO:0002302 |
oboInOwl:hasExactSynonym |
|
| 89 |
WARN |
duplicate_exact_synonym |
SO:0002303 |
oboInOwl:hasExactSynonym |
|
| 90 |
WARN |
duplicate_exact_synonym |
SO:0001297 |
oboInOwl:hasExactSynonym |
|
| 91 |
WARN |
duplicate_exact_synonym |
SO:0001920 |
oboInOwl:hasExactSynonym |
|
| 92 |
WARN |
duplicate_exact_synonym |
SO:0001282 |
oboInOwl:hasExactSynonym |
|
| 93 |
WARN |
duplicate_exact_synonym |
SO:0001918 |
oboInOwl:hasExactSynonym |
|
| 94 |
WARN |
duplicate_exact_synonym |
SO:0001290 |
oboInOwl:hasExactSynonym |
|
| 95 |
WARN |
duplicate_exact_synonym |
SO:0001919 |
oboInOwl:hasExactSynonym |
|
| 96 |
WARN |
duplicate_exact_synonym |
SO:0001760 |
oboInOwl:hasExactSynonym |
|
| 97 |
WARN |
duplicate_exact_synonym |
SO:0002194 |
oboInOwl:hasExactSynonym |
|
| 98 |
WARN |
duplicate_exact_synonym |
SO:0002198 |
oboInOwl:hasExactSynonym |
|
| 99 |
WARN |
duplicate_exact_synonym |
SO:0001759 |
oboInOwl:hasExactSynonym |
|
| 100 |
WARN |
duplicate_exact_synonym |
SO:0002195 |
oboInOwl:hasExactSynonym |
|
| 101 |
WARN |
duplicate_exact_synonym |
SO:0002199 |
oboInOwl:hasExactSynonym |
|
| 102 |
WARN |
duplicate_exact_synonym |
SO:0000336 |
oboInOwl:hasExactSynonym |
|
| 103 |
WARN |
duplicate_exact_synonym |
SO:0000516 |
oboInOwl:hasExactSynonym |
|
| 104 |
WARN |
duplicate_exact_synonym |
SO:0000777 |
oboInOwl:hasExactSynonym |
|
| 105 |
WARN |
duplicate_exact_synonym |
SO:0000778 |
oboInOwl:hasExactSynonym |
|
| 106 |
WARN |
duplicate_exact_synonym |
SO:0002087 |
oboInOwl:hasExactSynonym |
|
| 107 |
WARN |
duplicate_exact_synonym |
SO:0000043 |
oboInOwl:hasExactSynonym |
|
| 108 |
WARN |
duplicate_exact_synonym |
SO:0002193 |
oboInOwl:hasExactSynonym |
|
| 109 |
WARN |
duplicate_exact_synonym |
SO:0002197 |
oboInOwl:hasExactSynonym |
|
| 110 |
WARN |
duplicate_exact_synonym |
SO:0000298 |
oboInOwl:hasExactSynonym |
|
| 111 |
WARN |
duplicate_exact_synonym |
SO:0000657 |
oboInOwl:hasExactSynonym |
|
| 112 |
WARN |
duplicate_exact_synonym |
SO:0005836 |
oboInOwl:hasExactSynonym |
|
| 113 |
WARN |
duplicate_exact_synonym |
SO:0002189 |
oboInOwl:hasExactSynonym |
|
| 114 |
WARN |
duplicate_exact_synonym |
SO:0002196 |
oboInOwl:hasExactSynonym |
|
| 115 |
WARN |
duplicate_exact_synonym |
SO:0002200 |
oboInOwl:hasExactSynonym |
|
| 116 |
WARN |
duplicate_exact_synonym |
SO:0000253 |
oboInOwl:hasExactSynonym |
|
| 117 |
WARN |
duplicate_exact_synonym |
SO:0000725 |
oboInOwl:hasExactSynonym |
|
| 118 |
WARN |
duplicate_exact_synonym |
SO:0002252 |
oboInOwl:hasExactSynonym |
|
| 119 |
WARN |
duplicate_exact_synonym |
SO:0000418 |
oboInOwl:hasExactSynonym |
|
| 120 |
WARN |
duplicate_exact_synonym |
SO:0002251 |
oboInOwl:hasExactSynonym |
|
| 121 |
WARN |
duplicate_exact_synonym |
SO:0001062 |
oboInOwl:hasExactSynonym |
|
| 122 |
WARN |
duplicate_exact_synonym |
SO:0002250 |
oboInOwl:hasExactSynonym |
|
| 123 |
WARN |
duplicate_exact_synonym |
SO:0000419 |
oboInOwl:hasExactSynonym |
|
| 124 |
WARN |
duplicate_exact_synonym |
SO:0002249 |
oboInOwl:hasExactSynonym |
|
| 125 |
WARN |
duplicate_exact_synonym |
SO:0000382 |
oboInOwl:hasExactSynonym |
|
| 126 |
WARN |
duplicate_exact_synonym |
SO:0002226 |
oboInOwl:hasExactSynonym |
|
| 127 |
WARN |
duplicate_exact_synonym |
SO:0002185 |
oboInOwl:hasExactSynonym |
|
| 128 |
WARN |
duplicate_exact_synonym |
SO:0002381 |
oboInOwl:hasExactSynonym |
|
| 129 |
WARN |
duplicate_label_synonym |
SO:0000667 |
oboInOwl:hasExactSynonym |
insertion |
| 130 |
WARN |
duplicate_label_synonym |
SO:0001744 |
oboInOwl:hasExactSynonym |
UPD |
| 131 |
WARN |
duplicate_label_synonym |
SO:0001792 |
oboInOwl:hasExactSynonym |
non_coding_transcript_exon_variant |
| 132 |
WARN |
duplicate_label_synonym |
SO:0002114 |
oboInOwl:hasExactSynonym |
NMD_transcript |
| 133 |
WARN |
duplicate_label_synonym |
SO:0002131 |
oboInOwl:hasExactSynonym |
sense_intronic_lncRNA |
| 134 |
WARN |
duplicate_label_synonym |
SO:0002132 |
oboInOwl:hasExactSynonym |
sense_overlap_lncRNA |
| 135 |
WARN |
duplicate_label_synonym |
SO:0002183 |
oboInOwl:hasExactSynonym |
sense_overlap_lncRNA_gene |
| 136 |
WARN |
duplicate_label_synonym |
SO:0002184 |
oboInOwl:hasExactSynonym |
sense_intronic_lncRNA_gene |
| 137 |
WARN |
duplicate_label_synonym |
SO:0002185 |
oboInOwl:hasExactSynonym |
bidirectional_promoter_lncRNA_gene |
| 138 |
WARN |
duplicate_label_synonym |
SO:0002220 |
oboInOwl:hasExactSynonym |
function_uncertain_variant |
| 139 |
WARN |
duplicate_label_synonym |
SO:1000036 |
oboInOwl:hasExactSynonym |
inversion |
| 140 |
WARN |
missing_definition |
SO:0000026 |
IAO:0000115 |
|
| 141 |
WARN |
missing_definition |
SO:0000027 |
IAO:0000115 |
|
| 142 |
WARN |
missing_definition |
SO:0000067 |
IAO:0000115 |
|
| 143 |
WARN |
missing_definition |
SO:0000081 |
IAO:0000115 |
|
| 144 |
WARN |
missing_definition |
SO:0000977 |
IAO:0000115 |
|
| 145 |
WARN |
missing_definition |
obo:so#AAMOD |
IAO:0000115 |
|
| 146 |
WARN |
missing_definition |
obo:so#AGR |
IAO:0000115 |
|
| 147 |
WARN |
missing_definition |
obo:so#BS |
IAO:0000115 |
|
| 148 |
WARN |
missing_definition |
obo:so#RNAMOD |
IAO:0000115 |
|
| 149 |
WARN |
missing_definition |
obo:so#VAR |
IAO:0000115 |
|
| 150 |
WARN |
missing_definition |
obo:so#aa1 |
IAO:0000115 |
|
| 151 |
WARN |
missing_definition |
obo:so#aa3 |
IAO:0000115 |
|
| 152 |
WARN |
missing_definition |
obo:so#associated_with |
IAO:0000115 |
|
| 153 |
WARN |
missing_definition |
obo:so#dbsnp |
IAO:0000115 |
|
| 154 |
WARN |
missing_definition |
obo:so#dbvar |
IAO:0000115 |
|
| 155 |
WARN |
missing_definition |
obo:so#derives_from |
IAO:0000115 |
|
| 156 |
WARN |
missing_definition |
obo:so#ebi_variants |
IAO:0000115 |
|
| 157 |
WARN |
missing_definition |
obo:so#edited_from |
IAO:0000115 |
|
| 158 |
WARN |
missing_definition |
obo:so#edited_to |
IAO:0000115 |
|
| 159 |
WARN |
missing_definition |
obo:so#genome_of |
IAO:0000115 |
|
| 160 |
WARN |
missing_definition |
obo:so#guided_by |
IAO:0000115 |
|
| 161 |
WARN |
missing_definition |
obo:so#guides |
IAO:0000115 |
|
| 162 |
WARN |
missing_definition |
obo:so#has_origin |
IAO:0000115 |
|
| 163 |
WARN |
missing_definition |
obo:so#has_quality |
IAO:0000115 |
|
| 164 |
WARN |
missing_definition |
obo:so#homologous_to |
IAO:0000115 |
|
| 165 |
WARN |
missing_definition |
obo:so#member_of |
IAO:0000115 |
|
| 166 |
WARN |
missing_definition |
obo:so#orthologous_to |
IAO:0000115 |
|
| 167 |
WARN |
missing_definition |
obo:so#paralogous_to |
IAO:0000115 |
|
| 168 |
WARN |
missing_definition |
obo:so#position_of |
IAO:0000115 |
|
| 169 |
WARN |
missing_definition |
obo:so#recombined_from |
IAO:0000115 |
|
| 170 |
WARN |
missing_definition |
obo:so#recombined_to |
IAO:0000115 |
|
| 171 |
WARN |
missing_definition |
obo:so#sequence_of |
IAO:0000115 |
|
| 172 |
WARN |
missing_definition |
obo:so#similar_to |
IAO:0000115 |
|
| 173 |
WARN |
missing_definition |
obo:so#trans_spliced_from |
IAO:0000115 |
|
| 174 |
WARN |
missing_definition |
obo:so#trans_spliced_to |
IAO:0000115 |
|
| 175 |
WARN |
missing_obsolete_label |
SO:0000000 |
rdfs:label |
Sequence_Ontology |
| 176 |
WARN |
missing_obsolete_label |
SO:0000008 |
rdfs:label |
gene_sensu_your_favorite_organism |
| 177 |
WARN |
missing_obsolete_label |
SO:0000009 |
rdfs:label |
gene_class |
| 178 |
WARN |
missing_obsolete_label |
SO:0000038 |
rdfs:label |
match_set |
| 179 |
WARN |
missing_obsolete_label |
SO:0000041 |
rdfs:label |
sequence_operation |
| 180 |
WARN |
missing_obsolete_label |
SO:0000042 |
rdfs:label |
pseudogene_attribute |
| 181 |
WARN |
missing_obsolete_label |
SO:0000045 |
rdfs:label |
delete |
| 182 |
WARN |
missing_obsolete_label |
SO:0000046 |
rdfs:label |
insert |
| 183 |
WARN |
missing_obsolete_label |
SO:0000047 |
rdfs:label |
invert |
| 184 |
WARN |
missing_obsolete_label |
SO:0000048 |
rdfs:label |
substitute |
| 185 |
WARN |
missing_obsolete_label |
SO:0000049 |
rdfs:label |
translocate |
| 186 |
WARN |
missing_obsolete_label |
SO:0000050 |
rdfs:label |
gene_part |
| 187 |
WARN |
missing_obsolete_label |
SO:0000052 |
rdfs:label |
assortment_derived_deficiency |
| 188 |
WARN |
missing_obsolete_label |
SO:0000053 |
rdfs:label |
sequence_variant_affecting_regulatory_region |
| 189 |
WARN |
missing_obsolete_label |
SO:0000058 |
rdfs:label |
assortment_derived_aneuploid |
| 190 |
WARN |
missing_obsolete_label |
SO:0000064 |
rdfs:label |
gene_by_transcript_attribute |
| 191 |
WARN |
missing_obsolete_label |
SO:0000066 |
rdfs:label |
gene_by_polyadenylation_attribute |
| 192 |
WARN |
missing_obsolete_label |
SO:0000072 |
rdfs:label |
end_overlapping_gene |
| 193 |
WARN |
missing_obsolete_label |
SO:0000082 |
rdfs:label |
processed_transcript_attribute |
| 194 |
WARN |
missing_obsolete_label |
SO:0000085 |
rdfs:label |
gene_by_genome_location |
| 195 |
WARN |
missing_obsolete_label |
SO:0000086 |
rdfs:label |
gene_by_organelle_of_genome |
| 196 |
WARN |
missing_obsolete_label |
SO:0000106 |
rdfs:label |
non_capped_primary_transcript |
| 197 |
WARN |
missing_obsolete_label |
SO:0000109 |
rdfs:label |
sequence_variant_obs |
| 198 |
WARN |
missing_obsolete_label |
SO:0000115 |
rdfs:label |
transcript_feature |
| 199 |
WARN |
missing_obsolete_label |
SO:0000117 |
rdfs:label |
transcript_with_readthrough_stop_codon |