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Dashboard Analysis

Analysis of the ontologies in the dashboard

OBO Principles by status

Ontologies by number of axioms

Ontologies by number of classes

Ontologies by how many ontologies use it

Different serialisations used

syntax RDF/XML Syntax OWL/XML Syntax unknown
count 184 2 1

Breakdown of used Axiom Types

count mean std min 25% 50% 75% max
AnnotationAssertion 186 111336.786096 417582.726178 0.0 1681.0 7856.0 28947.0 3045028.0
Declaration 186 17751.812834 69052.629691 0.0 458.5 1285.0 4969.5 750569.0
SubClassOf 183 32050.438503 140401.652299 0.0 413.5 1714.0 6780.5 1526928.0
EquivalentClasses 129 2332.657754 11038.542155 0.0 0.0 16.0 222.0 129581.0
TransitiveObjectProperty 108 5.235294 9.286262 0.0 0.0 1.0 6.0 46.0
SubAnnotationPropertyOf 107 7.657754 15.634621 0.0 0.0 2.0 7.0 99.0
SubObjectPropertyOf 100 35.657754 84.256907 0.0 0.0 1.0 27.5 706.0
DisjointClasses 95 20.401070 59.530914 0.0 0.0 1.0 21.0 606.0
ObjectPropertyDomain 82 13.508021 25.815384 0.0 0.0 0.0 18.0 159.0
ObjectPropertyRange 82 13.229947 24.908555 0.0 0.0 0.0 18.0 152.0
InverseObjectProperties 75 8.139037 15.963733 0.0 0.0 0.0 12.0 116.0
ClassAssertion 65 164.828877 1338.200140 0.0 0.0 0.0 18.0 17243.0
SubPropertyChainOf 57 8.443850 23.061181 0.0 0.0 0.0 2.0 151.0
FunctionalObjectProperty 49 0.786096 1.677562 0.0 0.0 0.0 1.0 9.0
SymmetricObjectProperty 45 1.262032 6.527098 0.0 0.0 0.0 0.0 86.0
DifferentIndividuals 40 0.823529 6.017527 0.0 0.0 0.0 0.0 82.0
DataPropertyRange 38 1.144385 3.643452 0.0 0.0 0.0 0.0 30.0
DataPropertyDomain 38 1.497326 7.235199 0.0 0.0 0.0 0.0 90.0
IrrefexiveObjectProperty 37 0.417112 1.185634 0.0 0.0 0.0 0.0 8.0
InverseFunctionalObjectProperty 36 0.224599 0.500359 0.0 0.0 0.0 0.0 3.0
AnnotationPropertyRangeOf 33 1.187166 10.359259 0.0 0.0 0.0 0.0 140.0
SubDataPropertyOf 30 0.871658 3.592794 0.0 0.0 0.0 0.0 33.0
Rule 27 1.732620 6.038688 0.0 0.0 0.0 0.0 42.0
EquivalentObjectProperties 27 1.181818 5.013862 0.0 0.0 0.0 0.0 36.0
FunctionalDataProperty 23 0.443850 1.506546 0.0 0.0 0.0 0.0 11.0
AsymmetricObjectProperty 19 0.363636 1.674079 0.0 0.0 0.0 0.0 18.0
ObjectPropertyAssertion 15 57.508021 621.202514 0.0 0.0 0.0 0.0 8376.0
DisjointObjectProperties 13 0.160428 0.858816 0.0 0.0 0.0 0.0 10.0
ReflexiveObjectProperty 8 0.080214 0.413462 0.0 0.0 0.0 0.0 3.0
DisjointUnion 8 0.155080 0.899530 0.0 0.0 0.0 0.0 9.0
AnnotationPropertyDomain 8 0.165775 1.379304 0.0 0.0 0.0 0.0 17.0
DataPropertyAssertion 3 0.053476 0.536141 0.0 0.0 0.0 0.0 7.0
DatatypeDefinition 2 0.106952 1.390948 0.0 0.0 0.0 0.0 19.0

Breakdown of used OWL Class Expression constructs

count mean std min 25% 50% 75% max
Class 185 94169.395722 389949.607542 0.0 1448.5 5592.0 20838.5 4135990.0
ObjectSomeValuesFrom 166 20493.657754 100504.525515 0.0 41.5 485.0 3024.5 1118769.0
ObjectIntersectionOf 123 4706.839572 20895.003515 0.0 0.0 21.0 449.5 189636.0
ObjectUnionOf 85 20.443850 69.886012 0.0 0.0 0.0 10.5 767.0
ObjectAllValuesFrom 65 19.144385 131.708237 0.0 0.0 0.0 6.0 1764.0
ObjectComplementOf 61 77.074866 975.128348 0.0 0.0 0.0 2.0 13337.0
ObjectMinCardinality 56 3.502674 27.937791 0.0 0.0 0.0 1.0 377.0
ObjectExactCardinality 44 9.267380 92.132637 0.0 0.0 0.0 0.0 1255.0
ObjectOneOf 44 3.647059 28.326695 0.0 0.0 0.0 0.0 275.0
DataMinCardinality 24 0.208556 0.634434 0.0 0.0 0.0 0.0 4.0
DataExactCardinality 21 0.513369 1.614312 0.0 0.0 0.0 0.0 7.0
DataSomeValuesFrom 19 5.871658 63.183677 0.0 0.0 0.0 0.0 859.0
ObjectHasValue 17 486.550802 3888.715742 0.0 0.0 0.0 0.0 47723.0
ObjectMaxCardinality 16 0.695187 5.129309 0.0 0.0 0.0 0.0 67.0
DataHasValue 15 263.294118 3489.966277 0.0 0.0 0.0 0.0 47723.0
ObjectHasSelf 13 0.155080 0.791428 0.0 0.0 0.0 0.0 6.0
DataMaxCardinality 2 0.010695 0.103139 0.0 0.0 0.0 0.0 1.0
DataAllValuesFrom 1 0.026738 0.365636 0.0 0.0 0.0 0.0 5.0

OBO Score (Experimental)

ontology score score_dash score_impact
22 omo 0.923 0.889 0.957
30 ro 0.849 0.956 0.743
49 bfo 0.801 0.822 0.781
10 go 0.718 0.971 0.465
26 pato 0.706 0.956 0.455
21 obi 0.685 0.949 0.422
33 uberon 0.661 0.949 0.374
62 cl 0.578 0.882 0.273
5 envo 0.554 0.949 0.160
29 pr 0.550 0.876 0.225
2 doid 0.533 0.949 0.118
56 chebi 0.533 0.660 0.406
12 hp 0.526 0.933 0.118
23 omrse 0.520 0.949 0.091
15 maxo 0.507 0.993 0.021
16 mondo 0.506 0.949 0.064
17 mp 0.499 0.956 0.043
38 wbls 0.499 0.993 0.005
8 fbdv 0.499 0.993 0.005
122 nbo 0.497 0.876 0.118
19 oba 0.496 0.956 0.037
39 wbphenotype 0.494 0.978 0.011
31 symp 0.489 0.942 0.037
4 eco 0.488 0.971 0.005
0 apollo_sv 0.486 0.882 0.091
7 fbcv 0.485 0.949 0.021
11 hancestro 0.485 0.949 0.021
6 fbbt 0.483 0.956 0.011
27 plana 0.483 0.956 0.011
40 zfa 0.480 0.956 0.005
28 po 0.475 0.876 0.075
3 dpo 0.474 0.949 0.000
34 vbo 0.474 0.949 0.000
35 vo 0.473 0.882 0.064
55 cdno 0.469 0.933 0.005
32 trans 0.468 0.904 0.032
9 gno 0.466 0.927 0.005
132 ogms 0.465 0.711 0.219
167 stato 0.465 0.844 0.086
14 ico 0.463 0.882 0.043
25 opl 0.460 0.904 0.016
75 dron 0.457 0.844 0.070
79 ecto 0.453 0.889 0.016
24 ontoavida 0.452 0.904 0.000
93 geno 0.452 0.876 0.027
89 fypo 0.450 0.889 0.011
36 vt 0.447 0.882 0.011
42 afpo 0.446 0.876 0.016
20 obcs 0.446 0.876 0.016
129 obib 0.446 0.838 0.053
145 pcl 0.445 0.889 0.000
1 disdriv 0.445 0.889 0.000
150 phipo 0.444 0.882 0.005
18 mro 0.444 0.882 0.005
87 foodon 0.440 0.816 0.064
146 pco 0.437 0.778 0.096
53 caro 0.433 0.711 0.155
37 vto 0.433 0.867 0.000
176 wbbt 0.432 0.860 0.005
141 oostt 0.432 0.853 0.011
73 ddpheno 0.432 0.860 0.005
13 iao 0.430 0.860 0.000
67 cob 0.429 0.816 0.043
183 zp 0.424 0.838 0.011
175 upheno 0.418 0.816 0.021
78 ecocore 0.416 0.822 0.011
151 planp 0.413 0.822 0.005
44 aism 0.405 0.793 0.016
130 occo 0.405 0.809 0.000
91 gecko 0.403 0.800 0.005
43 agro 0.403 0.800 0.005
106 lepao 0.400 0.800 0.000
181 zeco 0.400 0.800 0.000
180 xpo 0.399 0.793 0.005
171 to 0.399 0.793 0.005
84 fideo 0.397 0.793 0.000
170 taxrank 0.395 0.778 0.011
168 swo 0.394 0.771 0.016
102 ido 0.394 0.660 0.128
109 mcro 0.390 0.780 0.000
120 mpio 0.388 0.771 0.005
59 chmo 0.388 0.727 0.048
125 ngbo 0.386 0.771 0.000
48 bco 0.386 0.771 0.000
177 xao 0.381 0.756 0.005
76 duo 0.380 0.749 0.011
160 rxno 0.377 0.749 0.005
68 colao 0.374 0.749 0.000
50 bmont 0.374 0.749 0.000
134 ohmi 0.372 0.733 0.011
135 ohpi 0.371 0.742 0.000
118 mop 0.371 0.727 0.016
72 ddanat 0.369 0.727 0.011
169 t4fs 0.369 0.727 0.011
123 ncit 0.368 0.587 0.150
57 cheminf 0.366 0.733 0.000
81 epio 0.363 0.727 0.000
51 bspo 0.362 0.638 0.086
41 ado 0.360 0.720 0.000
155 psdo 0.360 0.720 0.000
149 peco 0.360 0.704 0.016
174 uo 0.358 0.556 0.160
88 fovt 0.355 0.711 0.000
58 chiro 0.355 0.711 0.000
54 cdao 0.354 0.704 0.005
63 clao 0.354 0.704 0.005
156 pso 0.352 0.704 0.000
154 proco 0.352 0.704 0.000
80 emapa 0.351 0.698 0.005
90 gallont 0.349 0.698 0.000
70 cteno 0.344 0.689 0.000
69 cro 0.344 0.689 0.000
82 exo 0.338 0.644 0.032
46 apo 0.336 0.667 0.005
52 bto 0.335 0.638 0.032
104 kisao 0.334 0.667 0.000
77 ecao 0.334 0.667 0.000
158 rbo 0.333 0.660 0.005
83 fao 0.330 0.644 0.016
74 dideo 0.329 0.653 0.005
45 amphx 0.322 0.644 0.000
164 slso 0.322 0.644 0.000
97 hom 0.322 0.644 0.000
71 cvdo 0.322 0.638 0.005
61 cio 0.322 0.644 0.000
128 oarcs 0.322 0.644 0.000
162 scdo 0.322 0.638 0.005
153 ppo 0.319 0.638 0.000
152 poro 0.319 0.638 0.000
105 labo 0.319 0.638 0.000
142 opmi 0.318 0.593 0.043
86 fobi 0.316 0.631 0.000
182 zfs 0.314 0.622 0.005
165 so 0.314 0.467 0.160
110 mf 0.313 0.578 0.048
163 sepio 0.311 0.622 0.000
108 mco 0.311 0.622 0.000
107 ma 0.311 0.622 0.000
92 genepio 0.310 0.593 0.027
114 miapa 0.308 0.616 0.000
94 geo 0.304 0.571 0.037
131 ogg 0.304 0.549 0.059
161 sbo 0.302 0.600 0.005
143 ornaseq 0.300 0.600 0.000
148 pdumdv 0.300 0.600 0.000
121 ms 0.299 0.587 0.011
60 cido 0.299 0.593 0.005
133 ohd 0.296 0.593 0.000
147 pdro 0.293 0.571 0.016
65 clyh 0.289 0.578 0.000
96 hao 0.289 0.578 0.000
136 olatdv 0.289 0.578 0.000
127 oae 0.289 0.504 0.075
85 flopo 0.288 0.571 0.005
179 xlmod 0.285 0.571 0.000
98 hsapdv 0.280 0.533 0.027
124 ncro 0.280 0.549 0.011
111 mfoem 0.277 0.549 0.005
99 hso 0.277 0.549 0.005
95 gsso 0.274 0.527 0.021
66 cmo 0.273 0.498 0.048
140 ons 0.272 0.527 0.016
137 omit 0.268 0.498 0.037
116 mmusdv 0.267 0.533 0.000
119 mpath 0.263 0.489 0.037
178 xco 0.260 0.504 0.016
172 tto 0.256 0.511 0.000
126 nomen 0.252 0.504 0.000
113 mi 0.244 0.467 0.021
115 mmo 0.241 0.460 0.021
103 ino 0.241 0.460 0.021
138 omp 0.238 0.460 0.016
157 pw 0.235 0.453 0.016
112 mfomd 0.233 0.444 0.021
139 one 0.230 0.460 0.000
101 iceo 0.230 0.460 0.000
144 ovae 0.230 0.460 0.000
100 htn 0.230 0.460 0.000
159 rs 0.229 0.453 0.005
47 aro 0.227 0.438 0.016
173 txpo 0.222 0.438 0.005
117 mod 0.202 0.393 0.011
64 clo 0.202 0.333 0.070
166 spd 0.167 0.333 0.000
184 cto 0.000 0.000 0.005
185 ncbitaxon 0.000 0.000 0.000
186 ontoneo 0.000 0.000 0.000

OBO Score Summary

count mean std min 25% 50% 75% max
score 187.0 0.379519 0.123964 0.0 0.306 0.369 0.4465 0.923
score_dash 187.0 0.710476 0.185746 0.0 0.593 0.720 0.8760 0.993
score_impact 187.0 0.048604 0.127295 0.0 0.000 0.005 0.0320 0.957

OBO dependency graph