Level Rule Name Subject Property Value WARN annotation_whitespace GENO:0000243 IAO:0000116 Created subproperties 'approximates_sequence' and 'resolves to sequence'. Genotypes and other sequence variant artifacts are not always expected to completely specify a sequence, but rather provide some approximation based on available knowledge. The 'resolves_to_sequence' property can be used when the sequence variant artifact is able to completely resolve a sequence, and the 'approximates_sequence' property can be used when it does not. WARN annotation_whitespace GENO:0000244 IAO:0000116 Created subproperties 'approximates_sequence' and 'resolves to sequence'. Genotypes and other sequence variant artifacts are not always expected to completely specify a sequence, but rather provide some approximation based on available knowledge. The 'resolves_to_sequence' property can be used when the sequence variant artifact is able to completely resolve a sequence, and the 'approximates_sequence' property can be used when it does not. WARN duplicate_label_synonym GENO:0000017 IAO:0000118 reference sequence WARN duplicate_label_synonym GENO:0000501 IAO:0000118 wild-type allele WARN equivalent_class_axiom_no_genus GENO:0000960 GENO:0000251 GENO:0000481 WARN invalid_xref GENO:0000010 oboInOwl:hasDbXref OBI:genetic population background information WARN invalid_xref GENO:0000014 oboInOwl:hasDbXref SO:0001023 ! allele WARN invalid_xref GENO:0000019 oboInOwl:hasDbXref perhaps not same as SO:sequence collection, as here we explicitly include features that can have an extent of zero (and SO:sequence collection is a collection of regions that have an extent of at least one) WARN invalid_xref GENO:0000033 oboInOwl:hasDbXref SO:0001506 ! variant_genome (definition of SO term here is too vague to know if has same meaning as GENO class here) WARN invalid_xref GENO:0000666 oboInOwl:hasDbXref SO:0000831 (gene member region) WARN invalid_xref GENO:0000870 oboInOwl:hasDbXref SO:0001260 ! sequence_collection WARN missing_definition GENO:0000092 IAO:0000115 WARN missing_definition GENO:0000113 IAO:0000115 WARN missing_definition GENO:0000118 IAO:0000115 WARN missing_definition GENO:0000119 IAO:0000115 WARN missing_definition GENO:0000137 IAO:0000115 WARN missing_definition GENO:0000139 IAO:0000115 WARN missing_definition GENO:0000140 IAO:0000115 WARN missing_definition GENO:0000160 IAO:0000115 WARN missing_definition GENO:0000220 IAO:0000115 WARN missing_definition GENO:0000251 IAO:0000115 WARN missing_definition GENO:0000252 IAO:0000115 WARN missing_definition GENO:0000351 IAO:0000115 WARN missing_definition GENO:0000383 IAO:0000115 WARN missing_definition GENO:0000387 IAO:0000115 WARN missing_definition GENO:0000393 IAO:0000115 WARN missing_definition GENO:0000394 IAO:0000115 WARN missing_definition GENO:0000458 IAO:0000115 WARN missing_definition GENO:0000495 IAO:0000115 WARN missing_definition GENO:0000502 IAO:0000115 WARN missing_definition GENO:0000533 IAO:0000115 WARN missing_definition GENO:0000575 IAO:0000115 WARN missing_definition GENO:0000604 IAO:0000115 WARN missing_definition GENO:0000605 IAO:0000115 WARN missing_definition GENO:0000606 IAO:0000115 WARN missing_definition GENO:0000616 IAO:0000115 WARN missing_definition GENO:0000618 IAO:0000115 WARN missing_definition GENO:0000619 IAO:0000115 WARN missing_definition GENO:0000620 IAO:0000115 WARN missing_definition GENO:0000621 IAO:0000115 WARN missing_definition GENO:0000622 IAO:0000115 WARN missing_definition GENO:0000623 IAO:0000115 WARN missing_definition GENO:0000624 IAO:0000115 WARN missing_definition GENO:0000625 IAO:0000115 WARN missing_definition GENO:0000626 IAO:0000115 WARN missing_definition GENO:0000632 IAO:0000115 WARN missing_definition GENO:0000633 IAO:0000115 WARN missing_definition GENO:0000640 IAO:0000115 WARN missing_definition GENO:0000650 IAO:0000115 WARN missing_definition GENO:0000651 IAO:0000115 WARN missing_definition GENO:0000655 IAO:0000115 WARN missing_definition GENO:0000708 IAO:0000115 WARN missing_definition GENO:0000719 IAO:0000115 WARN missing_definition GENO:0000720 IAO:0000115 WARN missing_definition GENO:0000721 IAO:0000115 WARN missing_definition GENO:0000722 IAO:0000115 WARN missing_definition GENO:0000740 IAO:0000115 WARN missing_definition GENO:0000743 IAO:0000115 WARN missing_definition GENO:0000761 IAO:0000115 WARN missing_definition GENO:0000770 IAO:0000115 WARN missing_definition GENO:0000779 IAO:0000115 WARN missing_definition GENO:0000780 IAO:0000115 WARN missing_definition GENO:0000781 IAO:0000115 WARN missing_definition GENO:0000782 IAO:0000115 WARN missing_definition GENO:0000790 IAO:0000115 WARN missing_definition GENO:0000791 IAO:0000115 WARN missing_definition GENO:0000793 IAO:0000115 WARN missing_definition GENO:0000794 IAO:0000115 WARN missing_definition GENO:0000833 IAO:0000115 WARN missing_definition GENO:0000839 IAO:0000115 WARN missing_definition GENO:0000840 IAO:0000115 WARN missing_definition GENO:0000841 IAO:0000115 WARN missing_definition GENO:0000843 IAO:0000115 WARN missing_definition GENO:0000844 IAO:0000115 WARN missing_definition GENO:0000845 IAO:0000115 WARN missing_definition GENO:0000849 IAO:0000115 WARN missing_definition GENO:0000867 IAO:0000115 WARN missing_definition GENO:0000873 IAO:0000115 WARN missing_definition GENO:0000874 IAO:0000115 WARN missing_definition GENO:0000887 IAO:0000115 WARN missing_definition GENO:0000905 IAO:0000115 WARN missing_definition GENO:0000906 IAO:0000115 WARN missing_definition GENO:0000909 IAO:0000115 WARN missing_definition GENO:0000910 IAO:0000115 WARN missing_definition GENO:0000911 IAO:0000115 WARN missing_definition GENO:0000912 IAO:0000115 WARN missing_definition GENO:0000964 IAO:0000115 WARN missing_subset_declaration obo:geno#agr_zyg rdfs:subPropertyOf INFO lowercase_definition GENO:0000111 IAO:0000115 a population of homo sapiens grouped together in virtue of their sharing some commonality (either an inherent attribute or an externally assigned role) INFO lowercase_definition GENO:0000513 IAO:0000115 a sequence attribute of a chromosome or chromosomal region that has been abnormally duplicated or lost, as the result of a non-disjunction event or unbalanced translocation. INFO lowercase_definition GENO:0000602 IAO:0000115 an allelic state where a single allele exists at a particular location in the organellar genome (mitochondrial or plastid) of a cell/organism. INFO lowercase_definition GENO:0000603 IAO:0000115 an allelic state where more than one type of allele exists at a particular location in the organellar genome (mitochondrial or plastid) of a cell/organism. INFO lowercase_definition GENO:0000608 IAO:0000115 a relation to link a single locus complement to its zygosity. INFO lowercase_definition GENO:0000634 IAO:0000115 relation between an molecular agent and its molecular target