Level	Rule Name	Subject	Property	Value
ERROR	duplicate_definition	MOD:01716	IAO:0000115	The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-126 reagent acylated residue.
ERROR	duplicate_definition	MOD:01727	IAO:0000115	The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-126 reagent acylated residue.
ERROR	duplicate_definition	MOD:00534	IAO:0000115	modification from Unimod Post-translational
ERROR	duplicate_definition	MOD:00934	IAO:0000115	modification from Unimod Post-translational
ERROR	duplicate_definition	MOD:00936	IAO:0000115	modification from Unimod Post-translational
ERROR	duplicate_definition	MOD:00937	IAO:0000115	modification from Unimod Post-translational
ERROR	duplicate_definition	MOD:00938	IAO:0000115	modification from Unimod Post-translational
ERROR	duplicate_definition	MOD:01223	IAO:0000115	modification from Unimod Other -
ERROR	duplicate_definition	MOD:01224	IAO:0000115	modification from Unimod Other -
ERROR	duplicate_definition	MOD:01277	IAO:0000115	modification from Unimod Other -
ERROR	duplicate_definition	MOD:01278	IAO:0000115	modification from Unimod Other -
ERROR	duplicate_definition	MOD:01279	IAO:0000115	modification from Unimod Other -
ERROR	duplicate_definition	MOD:00576	IAO:0000115	modification from Unimod Other
ERROR	duplicate_definition	MOD:01319	IAO:0000115	modification from Unimod Other
ERROR	duplicate_definition	MOD:01320	IAO:0000115	modification from Unimod Other
ERROR	duplicate_definition	MOD:01321	IAO:0000115	modification from Unimod Other
ERROR	duplicate_definition	MOD:00760	IAO:0000115	modification from Unimod N-linked glycosylation - missing ref
ERROR	duplicate_definition	MOD:00762	IAO:0000115	modification from Unimod N-linked glycosylation - missing ref
ERROR	duplicate_definition	MOD:00763	IAO:0000115	modification from Unimod N-linked glycosylation - missing ref
ERROR	duplicate_definition	MOD:00516	IAO:0000115	modification from Unimod N-linked glycosylation
ERROR	duplicate_definition	MOD:00518	IAO:0000115	modification from Unimod N-linked glycosylation
ERROR	duplicate_definition	MOD:00519	IAO:0000115	modification from Unimod N-linked glycosylation
ERROR	duplicate_definition	MOD:00520	IAO:0000115	modification from Unimod N-linked glycosylation
ERROR	duplicate_definition	MOD:00521	IAO:0000115	modification from Unimod N-linked glycosylation
ERROR	duplicate_definition	MOD:00522	IAO:0000115	modification from Unimod N-linked glycosylation
ERROR	duplicate_definition	MOD:00523	IAO:0000115	modification from Unimod N-linked glycosylation
ERROR	duplicate_definition	MOD:00524	IAO:0000115	modification from Unimod N-linked glycosylation
ERROR	duplicate_definition	MOD:00525	IAO:0000115	modification from Unimod N-linked glycosylation
ERROR	duplicate_definition	MOD:00526	IAO:0000115	modification from Unimod N-linked glycosylation
ERROR	duplicate_definition	MOD:00527	IAO:0000115	modification from Unimod N-linked glycosylation
ERROR	duplicate_definition	MOD:00529	IAO:0000115	modification from Unimod N-linked glycosylation
ERROR	duplicate_definition	MOD:00565	IAO:0000115	modification from Unimod N-linked glycosylation
ERROR	duplicate_definition	MOD:00623	IAO:0000115	modification from Unimod N-linked glycosylation
ERROR	duplicate_definition	MOD:00759	IAO:0000115	modification from Unimod N-linked glycosylation
ERROR	duplicate_definition	MOD:01162	IAO:0000115	modification from Unimod N-linked glycosylation
ERROR	duplicate_definition	MOD:01358	IAO:0000115	modification from Unimod Isotopic label - Use when labelling post-digest
ERROR	duplicate_definition	MOD:01359	IAO:0000115	modification from Unimod Isotopic label - Use when labelling post-digest
ERROR	duplicate_definition	MOD:01234	IAO:0000115	modification from Unimod Isotopic label - alkaline phosphatase to dephosphorylate
ERROR	duplicate_definition	MOD:01235	IAO:0000115	modification from Unimod Isotopic label - alkaline phosphatase to dephosphorylate
ERROR	duplicate_definition	MOD:01236	IAO:0000115	modification from Unimod Isotopic label - alkaline phosphatase to dephosphorylate
ERROR	duplicate_definition	MOD:01188	IAO:0000115	modification from Unimod Isotopic label -
ERROR	duplicate_definition	MOD:01189	IAO:0000115	modification from Unimod Isotopic label -
ERROR	duplicate_definition	MOD:01191	IAO:0000115	modification from Unimod Isotopic label -
ERROR	duplicate_definition	MOD:01192	IAO:0000115	modification from Unimod Isotopic label -
ERROR	duplicate_definition	MOD:01195	IAO:0000115	modification from Unimod Isotopic label -
ERROR	duplicate_definition	MOD:01217	IAO:0000115	modification from Unimod Isotopic label -
ERROR	duplicate_definition	MOD:01218	IAO:0000115	modification from Unimod Isotopic label -
ERROR	duplicate_definition	MOD:01230	IAO:0000115	modification from Unimod Isotopic label -
ERROR	duplicate_definition	MOD:01287	IAO:0000115	modification from Unimod Isotopic label -
ERROR	duplicate_definition	MOD:01340	IAO:0000115	modification from Unimod Isotopic label -
ERROR	duplicate_definition	MOD:01341	IAO:0000115	modification from Unimod Isotopic label -
ERROR	duplicate_definition	MOD:00449	IAO:0000115	modification from Unimod Isotopic label
ERROR	duplicate_definition	MOD:00468	IAO:0000115	modification from Unimod Isotopic label
ERROR	duplicate_definition	MOD:00469	IAO:0000115	modification from Unimod Isotopic label
ERROR	duplicate_definition	MOD:00472	IAO:0000115	modification from Unimod Isotopic label
ERROR	duplicate_definition	MOD:00473	IAO:0000115	modification from Unimod Isotopic label
ERROR	duplicate_definition	MOD:00480	IAO:0000115	modification from Unimod Isotopic label
ERROR	duplicate_definition	MOD:00481	IAO:0000115	modification from Unimod Isotopic label
ERROR	duplicate_definition	MOD:00494	IAO:0000115	modification from Unimod Isotopic label
ERROR	duplicate_definition	MOD:00495	IAO:0000115	modification from Unimod Isotopic label
ERROR	duplicate_definition	MOD:00505	IAO:0000115	modification from Unimod Isotopic label
ERROR	duplicate_definition	MOD:00549	IAO:0000115	modification from Unimod Isotopic label
ERROR	duplicate_definition	MOD:00551	IAO:0000115	modification from Unimod Isotopic label
ERROR	duplicate_definition	MOD:00561	IAO:0000115	modification from Unimod Isotopic label
ERROR	duplicate_definition	MOD:00562	IAO:0000115	modification from Unimod Isotopic label
ERROR	duplicate_definition	MOD:00932	IAO:0000115	modification from Unimod Isotopic label
ERROR	duplicate_definition	MOD:00943	IAO:0000115	modification from Unimod Isotopic label
ERROR	duplicate_definition	MOD:00944	IAO:0000115	modification from Unimod Isotopic label
ERROR	duplicate_definition	MOD:01193	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01194	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01219	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01220	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01257	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01258	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01259	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01272	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01280	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01281	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01307	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01308	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01317	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01318	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01335	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01349	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01350	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01353	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01364	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01365	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01366	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01367	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:01368	IAO:0000115	modification from Unimod Chemical derivative -
ERROR	duplicate_definition	MOD:00470	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00471	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00484	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00485	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00486	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00487	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00488	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00489	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00490	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00491	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00499	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00509	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00532	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00533	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00535	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00542	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00543	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00548	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00550	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00566	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00572	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00573	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00574	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00575	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00586	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00592	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00606	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00607	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00608	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00609	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00610	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00613	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00618	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00620	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00621	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00622	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00625	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00626	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00627	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00629	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00630	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00631	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00633	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00634	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00635	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00639	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00640	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00922	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00923	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00928	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00939	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00941	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:01466	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:01467	IAO:0000115	modification from Unimod Chemical derivative
ERROR	duplicate_definition	MOD:00789	IAO:0000115	modification from Unimod - isotopic label ICPL method - The paper describes an H/D labeling strategy whereas the commercial product follows a C/13C labeling strategy. The digest is typically applied AFTER ICPL_light/heavy labeling, only Protein N-term labeling and Lys-specific labeling is applied.
ERROR	duplicate_definition	MOD:00790	IAO:0000115	modification from Unimod - isotopic label ICPL method - The paper describes an H/D labeling strategy whereas the commercial product follows a C/13C labeling strategy. The digest is typically applied AFTER ICPL_light/heavy labeling, only Protein N-term labeling and Lys-specific labeling is applied.
ERROR	duplicate_definition	MOD:00788	IAO:0000115	modification from Unimod
ERROR	duplicate_definition	MOD:00795	IAO:0000115	modification from Unimod
ERROR	duplicate_definition	MOD:00879	IAO:0000115	modification from Unimod
ERROR	duplicate_definition	MOD:01167	IAO:0000115	modification from Unimod
ERROR	duplicate_definition	MOD:01880	IAO:0000115	modification from RESID
ERROR	duplicate_definition	MOD:01898	IAO:0000115	modification from RESID
ERROR	duplicate_definition	MOD:01935	IAO:0000115	modification from RESID
ERROR	duplicate_definition	MOD:01955	IAO:0000115	modification from RESID
ERROR	duplicate_definition	MOD:01982	IAO:0000115	modification from RESID
ERROR	duplicate_definition	MOD:00956	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:00958	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:00959	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:00964	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:00970	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:00973	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:00974	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:00975	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:00977	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:00978	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:00979	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:00981	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:00983	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:00984	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:00986	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:00990	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:00991	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:00992	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:00993	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:00994	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:00996	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:00997	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:01002	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:01003	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:01004	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:01005	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:01009	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:01011	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:01013	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:01014	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:01016	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:01018	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:01019	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:01020	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:01021	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:01027	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:01030	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:01031	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:01035	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:01050	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:01051	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:01052	IAO:0000115	modification from DeltaMass
ERROR	duplicate_definition	MOD:01053	IAO:0000115	modification from DeltaMass