| Row |
Level |
Rule Name |
Subject |
Property |
Value |
| 0 |
WARN
| annotation_whitespace |
RO:0002093 |
rdfs:comment |
X ends_during Y iff: ((start(Y) before_or_simultaneous_with end(X)) AND end(X) before_or_simultaneous_with end(Y). @en |
| 1 |
WARN
| annotation_whitespace |
RO:0002101 |
IAO:0000115 |
relationship between a neuron and a neuron projection bundle (e.g.- tract or nerve bundle) that one or more of its projections travels through.
@en |
| 2 |
WARN
| annotation_whitespace |
RO:0002103 |
IAO:0000115 |
Relation between an anatomical structure (including cells) and a neuron that chemically synapses to it. @en |
| 3 |
WARN
| annotation_whitespace |
RO:0002108 |
IAO:0000424 |
BFO_0000051 some (GO_0042734 that BFO_0000050 some (GO_0045202 that BFO_0000051 some (GO_0061174 that BFO_0000051 some GO_0045211 that BFO_0000050 some ?Y)))
|
| 4 |
WARN
| annotation_whitespace |
RO:0002110 |
IAO:0000115 |
Relation between a neuron and some structure (e.g.- a brain region) in which it receives (chemical) synaptic input. @en |
| 5 |
WARN
| annotation_whitespace |
RO:0002115 |
IAO:0000115 |
Relation between a muscle and a motor neuron that synapses to it via a type III bouton.
|
| 6 |
WARN
| annotation_whitespace |
RO:0002120 |
IAO:0000115 |
Relation between a neuron and an anatomical structure (including cells) that it chemically synapses to.
@en |
| 7 |
WARN
| annotation_whitespace |
RO:0002121 |
IAO:0000115 |
Relation between a neuron and some structure (e.g.- a brain region) in which its dendrite receives synaptic input.
@en |
| 8 |
WARN
| annotation_whitespace |
RO:0002132 |
IAO:0000426 |
(forall (?x ?y)
(iff
(has_fasciculating_neuron_projection ?x ?y)
(exists (?nps ?npbs)
(and
(\"neuron projection bundle ; CARO_0001001\" ?x)
(\"neuron projection ; GO0043005\" ?y)
(\"neuron projection segment ; CARO_0001502\" ?nps)
(\"neuron projection bundle segment ; CARO_0001500\" ?npbs)
(part_of ?nps ?y)
(part_of ?npbs ?x)
(part_of ?nps ?npbs)
(forall (?npbss)
(if
(and
(\"neuron projection bundle subsegment ; CARO_0001501\" ?npbss)
(part_of ?npbss ?npbs)
)
(overlaps ?nps ?npbss)
))))))
|
| 9 |
WARN
| annotation_whitespace |
RO:0002161 |
IAO:0000425 |
Class: ?X DisjointWith: RO_0002162 some ?Y |
| 10 |
WARN
| annotation_whitespace |
RO:0002163 |
IAO:0000116 |
There are two ways to encode this as a shortcut relation. The other possibility to use an annotation assertion between two classes, and expand this to a disjointness axiom. @en |
| 11 |
WARN
| annotation_whitespace |
RO:0002215 |
IAO:0000115 |
A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. |
| 12 |
WARN
| annotation_whitespace |
RO:0002256 |
IAO:0000119 |
Developmental Biology, Gilbert, 8th edition, figure 6.5(F) |
| 13 |
WARN
| annotation_whitespace |
RO:0002299 |
IAO:0000112 |
an annotation of gene X to cell maturation with results_in_maturation_of CL:0000057 (fibroblast) means that the fibroblast is mature at the end of the process |
| 14 |
WARN
| annotation_whitespace |
RO:0002326 |
IAO:0000232 |
In the context of the Gene Ontology, contributes_to may be used only with classes from the molecular function ontology. |
| 15 |
WARN
| annotation_whitespace |
RO:0002341 |
IAO:0000115 |
Holds between p and l when p is a transportation or localization process and the outcome of this process is to move c from one location to another, and the route taken by c follows a path that is aligned_with l |
| 16 |
WARN
| annotation_whitespace |
RO:0002356 |
IAO:0000115 |
The relationship linking a cell and its participation in a process that results in the fate of the cell being specified. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. |
| 17 |
WARN
| annotation_whitespace |
RO:0002402 |
IAO:0000115 |
p has direct input c iff c is a participanti n p, c is present at the end of p, and c is not present at the beginning of c. |
| 18 |
WARN
| annotation_whitespace |
RO:0002504 |
IAO:0000116 |
This is a very strong relation. Often we will not have enough evidence to know for sure that there are no species within a lineage that lack the structure - loss is common in evolution. However, there are some statements we can make with confidence - no vertebrate lineage could persist without a brain or a heart. All primates are limbed. |
| 19 |
WARN
| annotation_whitespace |
RO:0002514 |
IAO:0000115 |
A relation that holds between two entities that have the property of being sequences or having sequences. |
| 20 |
WARN
| annotation_whitespace |
RO:0002535 |
IAO:0000232 |
This properties were created originally for the annotation of developmental or life cycle stages, such as for example Carnegie Stage 20 in humans. |
| 21 |
WARN
| annotation_whitespace |
RO:HOM0000036 |
oboInOwl:hasExactSynonym |
many:many homology |
| 22 |
WARN
| annotation_whitespace |
http://purl.obolibrary.org/obo/ro/ro-base.owl |
foaf:homepage |
https://github.com/oborel/obo-relations/^^http://www.w3.org/2001/XMLSchema#anyURI |
| 23 |
WARN
| duplicate_exact_synonym |
RO:0002599 |
IAO:0000118 |
treats |
| 24 |
WARN
| duplicate_exact_synonym |
RO:0002606 |
IAO:0000118 |
treats |
| 25 |
WARN
| duplicate_exact_synonym |
RO:0002224 |
IAO:0000118 |
started by |
| 26 |
WARN
| duplicate_exact_synonym |
RO:0002516 |
IAO:0000118 |
started by |
| 27 |
WARN
| duplicate_exact_synonym |
RO:0002409 |
IAO:0000118 |
indirectly inhibits |
| 28 |
WARN
| duplicate_exact_synonym |
RO:0011016 |
IAO:0000118 |
indirectly inhibits |
| 29 |
WARN
| duplicate_exact_synonym |
RO:0002407 |
IAO:0000118 |
indirectly activates |
| 30 |
WARN
| duplicate_exact_synonym |
RO:0011013 |
IAO:0000118 |
indirectly activates |
| 31 |
WARN
| missing_definition |
RO:0002001 |
IAO:0000115 |
|
| 32 |
WARN
| missing_definition |
RO:0002005 |
IAO:0000115 |
|
| 33 |
WARN
| missing_definition |
RO:0002006 |
IAO:0000115 |
|
| 34 |
WARN
| missing_definition |
RO:0002016 |
IAO:0000115 |
|
| 35 |
WARN
| missing_definition |
RO:0002017 |
IAO:0000115 |
|
| 36 |
WARN
| missing_definition |
RO:0002022 |
IAO:0000115 |
|
| 37 |
WARN
| missing_definition |
RO:0002081 |
IAO:0000115 |
|
| 38 |
WARN
| missing_definition |
RO:0002083 |
IAO:0000115 |
|
| 39 |
WARN
| missing_definition |
RO:0002084 |
IAO:0000115 |
|
| 40 |
WARN
| missing_definition |
RO:0002085 |
IAO:0000115 |
|
| 41 |
WARN
| missing_definition |
RO:0002086 |
IAO:0000115 |
|
| 42 |
WARN
| missing_definition |
RO:0002087 |
IAO:0000115 |
|
| 43 |
WARN
| missing_definition |
RO:0002088 |
IAO:0000115 |
|
| 44 |
WARN
| missing_definition |
RO:0002089 |
IAO:0000115 |
|
| 45 |
WARN
| missing_definition |
RO:0002090 |
IAO:0000115 |
|
| 46 |
WARN
| missing_definition |
RO:0002091 |
IAO:0000115 |
|
| 47 |
WARN
| missing_definition |
RO:0002092 |
IAO:0000115 |
|
| 48 |
WARN
| missing_definition |
RO:0002093 |
IAO:0000115 |
|
| 49 |
WARN
| missing_definition |
RO:0002111 |
IAO:0000115 |
|
| 50 |
WARN
| missing_definition |
RO:0002159 |
IAO:0000115 |
|
| 51 |
WARN
| missing_definition |
RO:0002222 |
IAO:0000115 |
|
| 52 |
WARN
| missing_definition |
RO:0002287 |
IAO:0000115 |
|
| 53 |
WARN
| missing_definition |
RO:0002297 |
IAO:0000115 |
|
| 54 |
WARN
| missing_definition |
RO:0002300 |
IAO:0000115 |
|
| 55 |
WARN
| missing_definition |
RO:0002301 |
IAO:0000115 |
|
| 56 |
WARN
| missing_definition |
RO:0002312 |
IAO:0000115 |
|
| 57 |
WARN
| missing_definition |
RO:0002322 |
IAO:0000115 |
|
| 58 |
WARN
| missing_definition |
RO:0002326 |
IAO:0000115 |
|
| 59 |
WARN
| missing_definition |
RO:0002343 |
IAO:0000115 |
|
| 60 |
WARN
| missing_definition |
RO:0002344 |
IAO:0000115 |
|
| 61 |
WARN
| missing_definition |
RO:0002354 |
IAO:0000115 |
|
| 62 |
WARN
| missing_definition |
RO:0002360 |
IAO:0000115 |
|
| 63 |
WARN
| missing_definition |
RO:0002405 |
IAO:0000115 |
|
| 64 |
WARN
| missing_definition |
RO:0002423 |
IAO:0000115 |
|
| 65 |
WARN
| missing_definition |
RO:0002424 |
IAO:0000115 |
|
| 66 |
WARN
| missing_definition |
RO:0002425 |
IAO:0000115 |
|
| 67 |
WARN
| missing_definition |
RO:0002426 |
IAO:0000115 |
|
| 68 |
WARN
| missing_definition |
RO:0002435 |
IAO:0000115 |
|
| 69 |
WARN
| missing_definition |
RO:0002444 |
IAO:0000115 |
|
| 70 |
WARN
| missing_definition |
RO:0002445 |
IAO:0000115 |
|
| 71 |
WARN
| missing_definition |
RO:0002447 |
IAO:0000115 |
|
| 72 |
WARN
| missing_definition |
RO:0002453 |
IAO:0000115 |
|
| 73 |
WARN
| missing_definition |
RO:0002455 |
IAO:0000115 |
|
| 74 |
WARN
| missing_definition |
RO:0002456 |
IAO:0000115 |
|
| 75 |
WARN
| missing_definition |
RO:0002457 |
IAO:0000115 |
|
| 76 |
WARN
| missing_definition |
RO:0002459 |
IAO:0000115 |
|
| 77 |
WARN
| missing_definition |
RO:0002460 |
IAO:0000115 |
|
| 78 |
WARN
| missing_definition |
RO:0002461 |
IAO:0000115 |
|
| 79 |
WARN
| missing_definition |
RO:0002462 |
IAO:0000115 |
|
| 80 |
WARN
| missing_definition |
RO:0002463 |
IAO:0000115 |
|
| 81 |
WARN
| missing_definition |
RO:0002464 |
IAO:0000115 |
|
| 82 |
WARN
| missing_definition |
RO:0002465 |
IAO:0000115 |
|
| 83 |
WARN
| missing_definition |
RO:0002466 |
IAO:0000115 |
|
| 84 |
WARN
| missing_definition |
RO:0002467 |
IAO:0000115 |
|
| 85 |
WARN
| missing_definition |
RO:0002468 |
IAO:0000115 |
|
| 86 |
WARN
| missing_definition |
RO:0002469 |
IAO:0000115 |
|
| 87 |
WARN
| missing_definition |
RO:0002470 |
IAO:0000115 |
|
| 88 |
WARN
| missing_definition |
RO:0002471 |
IAO:0000115 |
|
| 89 |
WARN
| missing_definition |
RO:0002481 |
IAO:0000115 |
|
| 90 |
WARN
| missing_definition |
RO:0002482 |
IAO:0000115 |
|
| 91 |
WARN
| missing_definition |
RO:0002483 |
IAO:0000115 |
|
| 92 |
WARN
| missing_definition |
RO:0002485 |
IAO:0000115 |
|
| 93 |
WARN
| missing_definition |
RO:0002486 |
IAO:0000115 |
|
| 94 |
WARN
| missing_definition |
RO:0002487 |
IAO:0000115 |
|
| 95 |
WARN
| missing_definition |
RO:0002502 |
IAO:0000115 |
|
| 96 |
WARN
| missing_definition |
RO:0002506 |
IAO:0000115 |
|
| 97 |
WARN
| missing_definition |
RO:0002535 |
IAO:0000115 |
|
| 98 |
WARN
| missing_definition |
RO:0002536 |
IAO:0000115 |
|
| 99 |
WARN
| missing_definition |
RO:0002537 |
IAO:0000115 |
|
| 100 |
WARN
| missing_definition |
RO:0002538 |
IAO:0000115 |
|
| 101 |
WARN
| missing_definition |
RO:0002549 |
IAO:0000115 |
|
| 102 |
WARN
| missing_definition |
RO:0002550 |
IAO:0000115 |
|
| 103 |
WARN
| missing_definition |
RO:0002555 |
IAO:0000115 |
|
| 104 |
WARN
| missing_definition |
RO:0002556 |
IAO:0000115 |
|
| 105 |
WARN
| missing_definition |
RO:0002557 |
IAO:0000115 |
|
| 106 |
WARN
| missing_definition |
RO:0002559 |
IAO:0000115 |
|
| 107 |
WARN
| missing_definition |
RO:0002563 |
IAO:0000115 |
|
| 108 |
WARN
| missing_definition |
RO:0002564 |
IAO:0000115 |
|
| 109 |
WARN
| missing_definition |
RO:0002574 |
IAO:0000115 |
|
| 110 |
WARN
| missing_definition |
RO:0002580 |
IAO:0000115 |
|
| 111 |
WARN
| missing_definition |
RO:0002585 |
IAO:0000115 |
|
| 112 |
WARN
| missing_definition |
RO:0002587 |
IAO:0000115 |
|
| 113 |
WARN
| missing_definition |
RO:0002588 |
IAO:0000115 |
|
| 114 |
WARN
| missing_definition |
RO:0002590 |
IAO:0000115 |
|
| 115 |
WARN
| missing_definition |
RO:0002591 |
IAO:0000115 |
|
| 116 |
WARN
| missing_definition |
RO:0002611 |
IAO:0000115 |
|
| 117 |
WARN
| missing_definition |
RO:0002616 |
IAO:0000115 |
|
| 118 |
WARN
| missing_definition |
RO:0002618 |
IAO:0000115 |
|
| 119 |
WARN
| missing_definition |
RO:0002619 |
IAO:0000115 |
|
| 120 |
WARN
| missing_definition |
RO:0002622 |
IAO:0000115 |
|
| 121 |
WARN
| missing_definition |
RO:0002623 |
IAO:0000115 |
|
| 122 |
WARN
| missing_definition |
RO:0002624 |
IAO:0000115 |
|
| 123 |
WARN
| missing_definition |
RO:0002625 |
IAO:0000115 |
|
| 124 |
WARN
| missing_definition |
RO:0002626 |
IAO:0000115 |
|
| 125 |
WARN
| missing_definition |
RO:0002627 |
IAO:0000115 |
|
| 126 |
WARN
| missing_definition |
RO:0002634 |
IAO:0000115 |
|
| 127 |
WARN
| missing_definition |
RO:0002635 |
IAO:0000115 |
|
| 128 |
WARN
| missing_definition |
RO:0004000 |
IAO:0000115 |
|
| 129 |
WARN
| missing_definition |
RO:0004001 |
IAO:0000115 |
|
| 130 |
WARN
| missing_definition |
RO:0004002 |
IAO:0000115 |
|
| 131 |
WARN
| missing_definition |
RO:0004003 |
IAO:0000115 |
|
| 132 |
WARN
| missing_definition |
RO:0004004 |
IAO:0000115 |
|
| 133 |
WARN
| missing_definition |
RO:0004005 |
IAO:0000115 |
|
| 134 |
WARN
| missing_definition |
RO:0004006 |
IAO:0000115 |
|
| 135 |
WARN
| missing_definition |
RO:0004010 |
IAO:0000115 |
|
| 136 |
WARN
| missing_definition |
RO:0004017 |
IAO:0000115 |
|
| 137 |
WARN
| missing_definition |
RO:0004018 |
IAO:0000115 |
|
| 138 |
WARN
| missing_definition |
RO:0004019 |
IAO:0000115 |
|
| 139 |
WARN
| missing_definition |
RO:0004023 |
IAO:0000115 |
|
| 140 |
WARN
| missing_definition |
RO:0004025 |
IAO:0000115 |
|
| 141 |
WARN
| missing_definition |
RO:0004032 |
IAO:0000115 |
|
| 142 |
WARN
| missing_definition |
RO:0004033 |
IAO:0000115 |
|
| 143 |
WARN
| missing_definition |
RO:0004046 |
IAO:0000115 |
|
| 144 |
WARN
| missing_definition |
RO:0004047 |
IAO:0000115 |
|
| 145 |
WARN
| missing_definition |
RO:0004049 |
IAO:0000115 |
|
| 146 |
WARN
| missing_definition |
RO:0004050 |
IAO:0000115 |
|
| 147 |
WARN
| missing_definition |
RO:0012008 |
IAO:0000115 |
|
| 148 |
WARN
| missing_definition |
RO:0015002 |
IAO:0000115 |
|
| 149 |
WARN
| missing_definition |
RO:0015010 |
IAO:0000115 |
|
| 150 |
WARN
| missing_definition |
RO:0016001 |
IAO:0000115 |
|
| 151 |
WARN
| missing_definition |
RO:0018030 |
IAO:0000115 |
|
| 152 |
WARN
| missing_obsolete_label |
RO:0004096 |
rdfs:label |
DEPRECATED inheres in@en |
| 153 |
WARN
| missing_obsolete_label |
RO:0004097 |
rdfs:label |
DEPRECATED bearer of@en |
| 154 |
INFO
| lowercase_definition |
RO:0000052 |
IAO:0000115 |
a relation between a specifically dependent continuant (the characteristic) and any other entity (the bearer), in which the characteristic depends on the bearer for its existence.@en |
| 155 |
INFO
| lowercase_definition |
RO:0000056 |
IAO:0000115 |
a relation between a continuant and a process, in which the continuant is somehow involved in the process@en |
| 156 |
INFO
| lowercase_definition |
RO:0000057 |
IAO:0000115 |
a relation between a process and a continuant, in which the continuant is somehow involved in the process@en |
| 157 |
INFO
| lowercase_definition |
RO:0000079 |
IAO:0000115 |
a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence@en |
| 158 |
INFO
| lowercase_definition |
RO:0000080 |
IAO:0000115 |
a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence@en |
| 159 |
INFO
| lowercase_definition |
RO:0000081 |
IAO:0000115 |
a relation between a role and an independent continuant (the bearer), in which the role specifically depends on the bearer for its existence@en |
| 160 |
INFO
| lowercase_definition |
RO:0000085 |
IAO:0000115 |
a relation between an independent continuant (the bearer) and a function, in which the function specifically depends on the bearer for its existence@en |
| 161 |
INFO
| lowercase_definition |
RO:0000086 |
IAO:0000115 |
a relation between an independent continuant (the bearer) and a quality, in which the quality specifically depends on the bearer for its existence@en |
| 162 |
INFO
| lowercase_definition |
RO:0000087 |
IAO:0000115 |
a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence@en |
| 163 |
INFO
| lowercase_definition |
RO:0000091 |
IAO:0000115 |
a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence@en |
| 164 |
INFO
| lowercase_definition |
RO:0000092 |
IAO:0000115 |
inverse of has disposition |
| 165 |
INFO
| lowercase_definition |
RO:0001000 |
IAO:0000115 |
a relation between two distinct material entities, the new entity and the old entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity@en |
| 166 |
INFO
| lowercase_definition |
RO:0001001 |
IAO:0000115 |
a relation between two distinct material entities, the old entity and the new entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity@en |
| 167 |
INFO
| lowercase_definition |
RO:0001015 |
IAO:0000115 |
a relation between two independent continuants, the location and the target, in which the target is entirely within the location@en |
| 168 |
INFO
| lowercase_definition |
RO:0001025 |
IAO:0000115 |
a relation between two independent continuants, the target and the location, in which the target is entirely within the location@en |
| 169 |
INFO
| lowercase_definition |
RO:0001901 |
IAO:0000115 |
## Elucidation
This is used when the statement/axiom is assumed to hold true 'eternally'
## How to interpret (informal)
First the "atemporal" FOL is derived from the OWL using the standard
interpretation. This axiom is temporalized by embedding the axiom
within a for-all-times quantified sentence. The t argument is added to
all instantiation predicates and predicates that use this relation.
## Example
Class: nucleus
SubClassOf: part_of some cell
forall t :
forall n :
instance_of(n,Nucleus,t)
implies
exists c :
instance_of(c,Cell,t)
part_of(n,c,t)
## Notes
This interpretation is *not* the same as an at-all-times relation |
| 170 |
INFO
| lowercase_definition |
RO:0001902 |
IAO:0000115 |
## Elucidation
This is used when the first-order logic form of the relation is
binary, and takes no temporal argument.
## Example:
Class: limb
SubClassOf: develops_from some lateral-plate-mesoderm
forall t, t2:
forall x :
instance_of(x,Limb,t)
implies
exists y :
instance_of(y,LPM,t2)
develops_from(x,y) |
| 171 |
INFO
| lowercase_definition |
RO:0002000 |
IAO:0000115 |
a relation between a 2D immaterial entity (the boundary) and a material entity, in which the boundary delimits the material entity@en |
| 172 |
INFO
| lowercase_definition |
RO:0002002 |
IAO:0000115 |
a relation between a material entity and a 2D immaterial entity (the boundary), in which the boundary delimits the material entity@en |
| 173 |
INFO
| lowercase_definition |
RO:0002010 |
IAO:0000115 |
x 'regulates in other organism' y if and only if: (x is the realization of a function to exert an effect on the frequency, rate or extent of y) AND (the agents of x are produced by organism o1 and the agents of y are produced by organism o2). |
| 174 |
INFO
| lowercase_definition |
RO:0002018 |
IAO:0000115 |
w 'has process component' p if p and w are processes, w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type. |
| 175 |
INFO
| lowercase_definition |
RO:0002082 |
IAO:0000115 |
x simultaneous with y iff ω(x) = ω(y) and ω(α ) = ω(α), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point and '=' indicates the same instance in time. |
| 176 |
INFO
| lowercase_definition |
RO:0002101 |
IAO:0000115 |
relationship between a neuron and a neuron projection bundle (e.g.- tract or nerve bundle) that one or more of its projections travels through.
@en |
| 177 |
INFO
| lowercase_definition |
RO:0002120 |
IAO:0000115 |
Relation between a neuron and an anatomical structure (including cells) that it chemically synapses to.
@en |
| 178 |
INFO
| lowercase_definition |
RO:0002131 |
IAO:0000115 |
x overlaps y if and only if there exists some z such that x has part z and z part of y |
| 179 |
INFO
| lowercase_definition |
RO:0002151 |
IAO:0000115 |
x partially overlaps y iff there exists some z such that z is part of x and z is part of y, and it is also the case that neither x is part of y or y is part of x |
| 180 |
INFO
| lowercase_definition |
RO:0002156 |
IAO:0000115 |
d derived_by_descent_from a if d is specified by some genetic program that is sequence-inherited-from a genetic program that specifies a. |
| 181 |
INFO
| lowercase_definition |
RO:0002157 |
IAO:0000115 |
inverse of derived by descent from |
| 182 |
INFO
| lowercase_definition |
RO:0002158 |
IAO:0000115 |
two individual entities d1 and d2 stand in a shares_ancestor_with relation if and only if there exists some a such that d1 derived_by_descent_from a and d2 derived_by_descent_from a. |
| 183 |
INFO
| lowercase_definition |
RO:0002160 |
IAO:0000115 |
x only in taxon y if and only if x is in taxon y, and there is no other organism z such that y!=z a and x is in taxon z. |
| 184 |
INFO
| lowercase_definition |
RO:0002161 |
IAO:0000115 |
x never in taxon T if and only if T is a class, and x does not instantiate the class expression \"in taxon some T\". Note that this is a shortcut relation, and should be used as a hasValue restriction in OWL. |
| 185 |
INFO
| lowercase_definition |
RO:0002162 |
IAO:0000115 |
x is in taxon y if an only if y is an organism, and the relationship between x and y is one of: part of (reflexive), developmentally preceded by, derives from, secreted by, expressed. |
| 186 |
INFO
| lowercase_definition |
RO:0002170 |
IAO:0000115 |
a is connected to b if and only if a and b are discrete structure, and there exists some connecting structure c, such that c connects a and b |
| 187 |
INFO
| lowercase_definition |
RO:0002176 |
IAO:0000115 |
c connects a if and only if there exist some b such that a and b are similar parts of the same system, and c connects b, specifically, c connects a with b. When one structure connects two others it unites some aspect of the function or role they play within the system. |
| 188 |
INFO
| lowercase_definition |
RO:0002177 |
IAO:0000115 |
a is attached to part of b if a is attached to b, or a is attached to some p, where p is part of b. |
| 189 |
INFO
| lowercase_definition |
RO:0002180 |
IAO:0000115 |
w 'has component' p if w 'has part' p and w is such that it can be directly disassembled into into n parts p, p2, p3, ..., pn, where these parts are of similar type. |
| 190 |
INFO
| lowercase_definition |
RO:0002201 |
IAO:0000115 |
inverse of has phenotype |
| 191 |
INFO
| lowercase_definition |
RO:0002202 |
IAO:0000115 |
x develops from y if and only if either (a) x directly develops from y or (b) there exists some z such that x directly develops from z and z develops from y |
| 192 |
INFO
| lowercase_definition |
RO:0002203 |
IAO:0000115 |
inverse of develops from |
| 193 |
INFO
| lowercase_definition |
RO:0002204 |
IAO:0000115 |
definition \"x has gene product of y if and only if y is a gene (SO:0000704) that participates in some gene expression process (GO:0010467) where the output of that process is either y or something that is ribosomally translated from x\" |
| 194 |
INFO
| lowercase_definition |
RO:0002205 |
IAO:0000115 |
x has gene product y if and only if x is a gene (SO:0000704) that participates in some gene expression process (GO:0010467) where the output of that process is either y or something that is ribosomally translated from y |
| 195 |
INFO
| lowercase_definition |
RO:0002206 |
IAO:0000115 |
x expressed in y if and only if there is a gene expression process (GO:0010467) that occurs in y, and one of the following holds: (i) x is a gene, and x is transcribed into a transcript as part of the gene expression process (ii) x is a transcript, and the transcription of x is part of the gene expression process (iii) x is a mature gene product such as a protein, and x was translated or otherwise processes from a transcript that was transcribed as part of this gene expression process |
| 196 |
INFO
| lowercase_definition |
RO:0002209 |
IAO:0000115 |
inverse of parasitoid of |
| 197 |
INFO
| lowercase_definition |
RO:0002210 |
IAO:0000115 |
inverse of directly develops from |
| 198 |
INFO
| lowercase_definition |
RO:0002211 |
IAO:0000115 |
p regulates q iff p is causally upstream of q, the execution of p is not constant and varies according to specific conditions, and p influences the rate or magnitude of execution of q due to an effect either on some enabler of q or some enabler of a part of q. |
| 199 |
INFO
| lowercase_definition |
RO:0002212 |
IAO:0000115 |
p negatively regulates q iff p regulates q, and p decreases the rate or magnitude of execution of q. |